Job Description P25522 Confidence 100.00% Date Thu Jan 5 11:41:55 GMT 2012 Rank 3 Aligned Residues 406 % Identity 35% Template c3geiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from chlorobium tepidum in complex2 with gcp Resolution 3.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		S	D	N	D	T	I	V	A	Q	A	T	P	P	G	R	G	G	V	G	I	L	R	I	S	G	F	K	A	R	E	V	A	E	T	V	L	G	K	L	.	.	.	.	.	.	.	.	P	K	P	R	Y	A	D	Y	L	P	F	K	D	A	D	G	S	V	L	D	Q	G	I	A	L	W	F	P	G	P	N	S	F
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.														.
Template Conservation																																																														.
Template Sequence		V	P	G	H	P	I	A	A	I	A	T	P	V	G	V	G	A	L	A	I	V	R	I	S	G	A	G	V	L	D	L	A	D	R	V	F	R	K	V	H	G	S	G	K	L	A	E	A	A	G	Y	T	A	H	F	G	R	L	Y	D	.	G	E	E	M	V	D	E	V	I	A	L	V	F	R	A	P	R	S	F
Template Known Secondary structure					S							S		S	S			S								S	T	T							T	T				S	S	S				S	T	T			T	T										.	T	T													S	S		S	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	E	D	V	L	E	L	Q	G	H	G	G	P	V	I	L	D	L	L	L	K	R	I	L	T	I	P	G	L	R	I	A	R	P	G	E	F	S	E	R	A	F	L	N	D	K	L	D	L	A	Q	A	E	A	I	A	D	L	I	D	A	S	S	E	Q	A	A	R	S	A	L	N	S	L	Q	G	A	F	S
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		T	A	E	Q	M	V	E	F	T	C	H	G	G	P	V	V	V	G	R	V	L	R	L	M	L	D	.	N	G	C	R	L	A	E	P	G	E	F	T	R	R	A	F	L	N	G	R	I	D	L	L	Q	A	E	A	I	G	E	M	I	H	A	R	T	E	S	A	Y	R	T	A	V	S	Q	M	K	G	D	L	S
Template Known Secondary structure		T	S	S																								.	T	T						B	T									T	T	S	S																S													T
Template Predicted Secondary structure																												.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	N	H	L	V	E	A	L	T	H	L	R	I	Y	V	E	A	A	I	D	F	P	D	E	E	I	D	F	L	S	D	G	K	I	E	A	Q	L	N	D	V	I	A	D	L	D	A	V	R	A	E	A	R	Q	G	S	L	L	R	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	L	G	G	L	R	E	Q	L	I	R	S	C	A	L	I	E	L	E	L	D	F	S	E	E	D	V	E	F	Q	S	R	D	E	L	T	M	Q	I	E	T	L	R	S	E	V	N	R	L	I	D	S	Y	Q	H	G	R	I	V	S	E	G	V	S	T	V	I	A	G	K	P	N	A	G	K	S	T	L	L
Template Known Secondary structure																						T	T		S	S				S	S																																										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	L	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	F	I	H	D	K	T	M	F	R	L	T	D	M	K	M	A	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	L	I	L	Y	L	L	D	L	G	T	E	R	L	D	D	E
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T											S	.	.	.	.	.	.	.	.	.	.	.	.	S		S								T	T	T	S	S	S			T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.																											.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270													.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.					.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	.	.	.	.	E	T	L	G	M	S	E	V	N	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F	D	T	N	M	E	G	G	F	L	A	R
Query Conservation																														.	.	.	.
Alig confidence												.																		.	.	.	.																																				.	.	.	.	.	.
Template Conservation												.																																																									.	.	.	.	.	.
Template Sequence		L	T	E	I	R	E	L	K	A	A	.	H	P	A	A	K	F	L	T	V	A	N	K	L	D	R	A	A	N	A	D	A	L	I	R	A	I	A	D	G	T	G	T	E	V	I	G	I	S	A	L	N	G	D	G	I	D	T	L	K	Q	H	M	G	D	L	V	.	.	.	.	.	.	K	S	V	L	V	T	S
Template Known Secondary structure		T										.		T	T	S									T	T	T		S	S											T	T	T	S						B	T	T	T	T	B	S									T	T	T	T	.	.	.	.	.	.							S
Template Predicted Secondary structure												.																																																									.	.	.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.							.	.	.	.	.	.	400
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	H	L	Q	A	L	E	Q	A	A	E	H	L	Q	Q	G	K	A	Q	L	L	G	A	W	A	G	E	L	L	A	E	E	L	R	L	A	Q	Q	N	L	S	E	I	T	G	E	F	T	S	D	D	L	L	G	R	I	F	S	S	F	C	I	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	H	Y	E	A	L	R	N	A	S	D	A	L	Q	N	A	L	E	L	I	A	H	E	S	E	T	E	L	I	A	F	E	L	R	A	A	L	D	Y	V	G	Q	I	T	G	K	V	V	N	E	E	V	L	N	T	I	F	D	K	F	C	I	G	K
Template Known Secondary structure		T	T																					T	T																					T	T	S	S			S	S							T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.