Job Description P25522 Confidence 100.00% Date Thu Jan 5 11:41:55 GMT 2012 Rank 2 Aligned Residues 427 % Identity 38% Template c3gehA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn Resolution 3.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure															.	.																									.	.	.	.																	.
Query SS confidence															.	.																									.	.	.	.																	.
Query Sequence		M	S	D	N	D	T	I	V	A	Q	A	T	P	.	.	P	G	R	G	G	V	G	I	L	R	I	S	G	F	K	A	R	E	V	A	E	T	V	L	.	.	.	.	G	K	L	P	K	P	R	Y	A	D	Y	L	P	F	K	D	.	A	D	G	S	V	L	D	Q	G	I	A	L	W	F	P	G	P	N	S	F
Query Conservation															.	.																									.	.	.	.																	.
Alig confidence															.	.																									.	.	.	.																	.
Template Conservation
Template Sequence		M	A	I	T	G	T	I	A	A	I	A	T	A	I	V	P	Q	Q	G	S	V	G	I	V	R	V	S	G	S	Q	A	I	A	I	A	Q	T	L	F	D	A	P	G	K	Q	V	W	E	S	H	R	I	L	Y	G	Y	I	R	H	P	Q	T	R	Q	I	V	D	E	A	L	L	L	L	M	K	A	P	R	S	Y
Template Known Secondary structure		S	S			S							S			B	T	T	B		S								S	T	T													S						T	T										S	S	S														T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	E	D	V	L	E	L	Q	G	H	G	G	P	V	I	L	D	L	L	L	K	R	I	L	T	I	P	G	L	R	I	A	R	P	G	E	F	S	E	R	A	F	L	N	D	K	L	D	L	A	Q	A	E	A	I	A	D	L	I	D	A	S	S	E	Q	A	A	R	S	A	L	N	S	L	Q	G	A	F	S
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		T	R	E	D	V	V	E	F	H	C	H	G	G	I	I	A	V	Q	Q	V	L	Q	L	C	L	E	.	S	G	A	R	L	A	Q	P	G	E	F	T	L	R	A	F	L	N	G	R	L	D	L	T	Q	A	E	S	I	A	D	L	V	G	A	R	S	P	Q	A	A	Q	T	A	L	A	G	L	Q	G	K	L	A
Template Known Secondary structure		S	S	S										S	S	S												.	T	T						T	T									T	T	S																	S													T	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	N	H	L	V	E	A	L	T	H	L	R	I	Y	V	E	A	A	I	D	F	P	D	E	E	I	D	F	L	S	D	G	K	I	E	A	Q	L	N	D	V	I	A	D	L	D	A	V	R	A	E	A	R	Q	G	S	L	L	R	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		H	P	I	R	Q	L	R	A	N	C	L	D	I	L	A	E	I	E	A	R	I	D	F	E	.	E	D	L	P	P	L	D	D	E	A	I	I	S	D	I	E	N	I	A	A	E	I	S	Q	L	L	A	T	K	D	K	G	E	L	L	R	T	G	L	K	V	A	I	V	G	R	P	N	V	G	K	S	S	L	L
Template Known Secondary structure																						T	T	S	S	.	S	S	S					T	T	T																T	T	T																			T	T	S	S
Template Predicted Secondary structure																										.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	W	S	Q	S	D	R	A	I	V	T	D	L	P	G	T	T	R	D	V	V	E	S	Q	L	V	V	G	G	I	P	V	Q	V	L	D	Q	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	A	D	L	V	L	L	T	I	D	A	A	T	G	W	T	T	G	D
Template Known Secondary structure									B	S			S			T	T													T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		S								T	T	T		S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.																																.	.
Query SS confidence																																		.	.	.																																.	.
Query Sequence		A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	T	L	G	.	.	.	M	S	E	V	N	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	.	.	G	F	D	T	N	M	E	G	G	F	L	A
Query Conservation																																		.	.	.																																.	.
Alig confidence									.	.	.	.	.																					.	.	.																																.	.
Template Conservation									.	.	.	.	.
Template Sequence		Q	E	I	Y	E	Q	V	.	.	.	.	.	K	H	R	P	L	I	L	V	M	N	K	I	D	L	V	E	K	Q	L	I	T	S	L	E	Y	P	E	N	I	T	Q	I	V	H	T	A	A	A	Q	K	Q	G	I	D	S	L	E	T	A	I	L	E	I	V	Q	T	G	K	V	Q	A	A	D	M	D	L	A	I
Template Known Secondary structure									.	.	.	.	.	T	T	S									T	T	S	S		G	G	G	S	T	T					T	T								B	T	T	T	T	B	S													T	T	S	S	S	S	S			S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	H	L	Q	A	L	E	Q	A	A	E	H	L	Q	Q	G	K	A	Q	L	L	G	A	W	A	G	E	L	L	A	E	E	L	R	L	A	Q	Q	N	L	S	E	I	T	G	E	F	T	S	D	D	L	L	G	R	I	F	S	S	F	C	I	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	R	Q	A	A	A	L	T	Q	A	K	M	S	L	E	Q	V	Q	A	T	I	T	Q	Q	L	P	L	D	F	W	T	I	D	L	R	G	A	I	Q	A	L	G	E	I	T	G	E	E	V	T	E	S	V	L	D	R	I	F	S	R	F	C	I	G	K
Template Known Secondary structure																							T	T	T	T			G	G	G	T																T	S	S												T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.