Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence96.95%DateThu Jan 5 11:41:55 GMT 2012
Rank323Aligned Residues112
% Identity29%Templatec3fvqB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:fe(3+) ions import atp-binding protein fbpc; PDBTitle: crystal structure of the nucleotide binding domain fbpc2 complexed with atp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240.........250.........260.........270.....
Predicted Secondary structure 































.................
Query SS confidence 






























































. . . . . . . . . . . . . . . . .
Query Sequence  LREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLR. . . . . . . . . . . . . . . . .
Query Conservation 
  

 
 


 









 
     
 

   


 
         
  
 
 



  .................
Alig confidence 




























............





















.................
Template Conservation 
  

   


 








  
 
   ............   
 
   
  
             
            
Template Sequence  LDPGEILFIIGASGCGKTTLLRCLAGFEQ. . . . . . . . . . . . PDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPH
Template Known Secondary structure 
TT
STTSSTSS
............
STTTT

GGG



TT



TT
Template Predicted Secondary structure 













............





























Template SS confidence 















































































   27..30.........40.........50..... ....60.........70.........80.........90....
 
   276...280.........290.........300.........310...
Predicted Secondary structure  ..........................................











Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .





































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDP
Query Conservation  ..........................................      
             




 




       
Alig confidence  ..........................................





































Template Conservation    
                         
    
          




 


 




   
 








 

    
Template Sequence  LTVYRNIAYGLGNGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLR
Template Known Secondary structure  S
TTSTTSS

ST
GGGTT

GGGS
TT

SSTTTTS
Template Predicted Secondary structure 







































Template SS confidence 















































































   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   314.....320.........330......
Predicted Secondary structure 




Query SS confidence 






















Query Sequence  AEIWPEFIARLPAKLPITVVRNK
Query Conservation                 




 

Alig confidence 






















Template Conservation    
   
  
    
 


 


Template Sequence  RQIREDMIAALRANGKSAVFVSH
Template Known Secondary structure  TT


Template Predicted Secondary structure 


Template SS confidence 






















   175....180.........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions