Job Description P25522 Confidence 99.62% Date Thu Jan 5 11:41:55 GMT 2012 Rank 98 Aligned Residues 137 % Identity 22% Template c3cb4D_ PDB info PDB header:translation Chain: D: PDB Molecule:gtp-binding protein lepa; PDBTitle: the crystal structure of lepa Resolution 2.80 Å

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A	D
Query Conservation
Alig confidence										.	.	.	.													.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.													.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Sequence		N	F	S	I	I	A	H	I	.	.	.	.	S	T	L	S	D	R	I	I	Q	I	C	G	.	.	.	.	.	.	.	G	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S	Y	E	.	.	.	.	.	.	.	.	V	S	R	S	L	A	A	C	E
Template Known Secondary structure										.	.	.	.											T	T	.	.	.	.	.	.	.											T	T	S														G	G	G				.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure										.	.	.	.													.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.									.	.	60	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.									.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	.	.	.	.	.	.	.	.	E	T	L	G	M	S	E	V	N	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L	R
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																.	.	.	.	.	.	.	.
Template Conservation																												.	.	.
Template Sequence		G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	.	.	.	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L
Template Known Secondary structure									T	T	T				T												T	.	.	.	T										T	T	S	T	T														T					T	T						T	T	T		T	T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	L	K	Q	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	V	R	D	I
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions