Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence99.62%DateThu Jan 5 11:41:55 GMT 2012
Rank98Aligned Residues137
% Identity22%Templatec3cb4D_
PDB info PDB header:translationChain: D: PDB Molecule:gtp-binding protein lepa; PDBTitle: the crystal structure of lepa
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQAD
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Template Sequence  NFSIIAHI. . . . STLSDRIIQICG. . . . . . . GQSVTLDYKASDGETYQLNFIDTPGHVDFSYE. . . . . . . . VSRSLAACE
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   6...10... ......20..... ....30.........40.........50....... ..60......
 
   298.300.........310.........320.........330.........340. ........350.........360.........
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Query Sequence  RVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITG. . . . . . . . ETLGMSEVNGHALIRLSARTGEGVDVLR
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Template Sequence  GALLVVDAGQGVEAQTLANCYTAMEM. . . DLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVL
Template Known Secondary structure  TTT


TT...T

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   97..100.........110.........120.. .......130.........140.........150.........160.........170...
 
   370......
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Query Sequence  NHLKQSM
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Template Sequence  ERLVRDI
Template Known Secondary structure  S
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   174.....180
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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