Job Description P25522 Confidence 99.90% Date Thu Jan 5 11:41:55 GMT 2012 Rank 21 Aligned Residues 197 % Identity 21% Template c3a1vB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:iron(ii) transport protein b; PDBTitle: crystal structue of the cytosolic domain of t. maritima feob2 iron iransporter in apo form Resolution 2.40 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A
Query Conservation
Alig confidence																											.															.
Template Conservation																											.															.
Template Sequence		V	K	V	A	L	A	G	C	P	N	V	G	K	T	S	L	F	N	A	L	T	G	T	K	Q	.	Y	V	A	N	W	P	G	V	T	V	E	K	K	E	.	V	F	T	Y	K	G	Y	T	I	N	L	I	D	L	P	G	T	Y	S	L	G	Y	S	S	I	D	E	K	I	A	R	D	Y	L	L	K	G	D	A
Template Known Secondary structure										T	T	S	S										T	T			.					S	T	T	S		S					.					T	T												S	S			S	S	S													S
Template Predicted Secondary structure																											.															.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	.	E	T	L	G	M	S	E	V	N	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S
Query Conservation																																															.
Alig confidence															.	.	.	.	.																												.
Template Conservation															.	.	.	.	.
Template Sequence		D	L	V	I	L	V	A	D	S	V	N	P	E	.	.	.	.	.	Q	S	L	Y	L	L	L	E	I	L	E	M	E	K	K	V	I	L	A	M	T	K	K	T	G	M	K	I	D	R	Y	E	L	Q	K	H	L	G	I	P	V	V	F	T	S	S	V	T	G	E	G	L	E	E	L	K	E	K	I	V	E	Y
Template Known Secondary structure		S								T	T				.	.	.	.	.											T	T											T	T															S							T	T	T			S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	F	D	T	N	M	E	G	G	F	L	A	R	R	R	H	L	Q	A	L	E	Q	A	A	E	H	L	Q	Q	G	K	A	Q	L	L	G	A	W	A	G	E	L	L	A	E	E	L
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		A	Q	K	N	T	I	L	H	R	M	I	L	D	Y	.	.	.	G	E	K	V	E	S	E	I	K	K	V	E	N	F	L	R	D	K	K	L	R	I	N	P	R	Y	F	A	L	K	Y
Template Known Secondary structure						S		S								.	.	.															T	T	T	S			S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions