Job Description P25522 Confidence 99.84% Date Thu Jan 5 11:41:55 GMT 2012 Rank 31 Aligned Residues 194 % Identity 12% Template c2xtpA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of nucleotide-free human gimap2, amino2 acid residues 1-260 Resolution 1.50 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																						.																																									.	.	.
Query SS confidence																																						.																																									.	.	.
Query Sequence		E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	.	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	.	.	.
Query Conservation																																						.																																									.	.	.
Alig confidence																																						.																																									.	.	.
Template Conservation
Template Sequence		S	E	L	R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	Q	A	F	E	S	K	L	G	S	Q	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R	E	I	V	I	I	D	T	P	D	X	F	S	W	K	D	H	C	E	A	L	Y	K	E	V	Q	R	C	Y	L
Template Known Secondary structure												T	T	S											T	S			S				T	T	S						S									T	T										G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.															.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																							.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	.	.	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	S	E	V	N	G	H	A	L
Query Conservation																																							.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																						.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		L	S	A	P	G	P	H	V	L	L	L	V	T	Q	L	.	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	X	G	H	T	I	V	L	F	T	H	K	E	D	L	N	G	G	S	L	X	D	Y	X	H	D	S	D	N	K	A	L	S	K	L	V	A	A	C	G	G	R	I
Template Known Secondary structure				T	T			S								T	.	T																			G	G	G	G	G	G								G	G	G	G	T	T																						T	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		355						.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		I	.	.	.	.	.	R	L	S	A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F	D	T	N	M	E	G	G	F	L	A	R	R	R	H	L	Q	A	L	E	Q	A	A	E	H	L	Q	Q	G	K	A	Q	L	L	G
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.																									.	.	.
Template Conservation																																.	.	.
Template Sequence		C	A	F	N	N	R	A	E	G	S	N	Q	D	D	Q	V	K	E	L	X	D	C	I	E	D	L	L	X	E	K	.	.	.	N	G	D	H	Y	T	N	G	L	Y	S	L	I	V	K	E	F	K	Q	S	L	I	K	Y	X	E	T	Q	R	S
Template Known Secondary structure						T	T																								T	.	.	.	T	T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions