Job Description P25522 Confidence 97.47% Date Thu Jan 5 11:41:55 GMT 2012 Rank 307 Aligned Residues 164 % Identity 19% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	N	H	L	V	E	A	L	T	H	L	R	I	Y	V	E	A	A	I	D	F	P	D	E	E	I	D	F	L	S	D	G	K	I	E	A	Q	L	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	A	D	L	D	A	V	R	A	E	A	R	Q	G	S	L	L	R	E	G	M	K
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	R	K	A	E	K	L	L	Q	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	K	E	S	T	K	T	N	T	L	K	K	L	L	R	F	S	V	E	A	G	G	L	T	E	E	N	V	V	G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	E	P	I	H	S	K	Y
Template Known Secondary structure													S	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T					S	S	S				S	S	S												T	S			S	T	T	S				S		S	S	B
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.														.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.								.	.	240	.	.	.	.	.	.	.	.																								.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	.	.	.	.	.	.	.	G	R	E	A	A	I	V	T	D	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I
Query Conservation																					.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	L	F	G	S	T	G	A	G	K	T	T	T	L	A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	T	Y	R	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L	Q	A	P	L	E	V	C	Y	T	K	E	E	F	Q	Q	A	K	E	L	F	S	E	Y	D	H	V	F
Template Known Secondary structure								S	S	S																T	S												S	S	T	T	T	T					T					T	T							S	S										T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D
Query Conservation
Alig confidence																		.	.																								.	.	.	.	.
Template Conservation																		.	.																								.	.	.	.	.
Template Sequence		V	D	T	A	G	R	N	F	K	D	P	Q	Y	I	D	E	.	.	L	K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V	L	S	A	T	A	K	Y	.	.	.	.	.	E	D	M	K	H	I	V	K	R	F	S	S	V	P	V	N	Q	Y	I	F	T	K	I	D
Template Known Secondary structure										S	S	G	G	G	T			.	.					S				T	T	B								T	T	S			.	.	.	.	.				T	T	T	T	T	T	S	S	S	S										T	T
Template Predicted Secondary structure																		.	.																								.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions