Job Description P25522 Confidence 99.32% Date Thu Jan 5 11:41:55 GMT 2012 Rank 230 Aligned Residues 144 % Identity 31% Template c2p5sB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:ras and ef-hand domain containing; PDBTitle: rab domain of human rasef in complex with gdp Resolution 2.15 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A
Query Conservation
Alig confidence																										.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Sequence		Y	K	I	V	L	A	G	D	A	A	V	G	K	S	S	F	L	M	R	L	C	K	N	E	.	.	.	.	.	.	F	R	G	V	D	F	Q	M	K	T	L	I	V	D	G	E	R	T	V	L	Q	L	W	D	T	A	G	Q	E	R	F	R	S	I	.	.	.	.	.	.	.	.	A	K	S	Y	F	R	K	A
Template Known Secondary structure								S	S	T	T	S	S											S		.	.	.	.	.	.														T	T											T	T		T	T					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.							.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.									600	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.														.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	L	G	M	S	E	V	N	G	H	A	L	I	R	L	S	A	R	T	G	E
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		D	G	V	L	L	L	Y	D	V	T	C	E	K	.	.	S	F	L	N	I	R	E	W	V	D	M	I	E	D	A	A	V	P	I	M	L	V	G	N	K	A	D	I	R	D	T	A	A	T	E	G	Q	K	C	V	P	G	H	F	G	E	K	L	A	M	T	Y	G	A	L	F	C	E	T	S	A	K	D	G	S
Template Known Secondary structure		S								T	T				.	.				T																						G	G	G							T	T																	T								T	T	T		T
Template Predicted Secondary structure															.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.			.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	D	V	L	R	N	H	L	K	Q	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	V	E	A	V	L	H	L	A	R	E	V
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		696	.	.	.	700	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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