Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence99.94%DateThu Jan 5 11:41:55 GMT 2012
Rank12Aligned Residues194
% Identity24%Templatec2hjgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:gtp-binding protein enga; PDBTitle: the crystal structure of the b. subtilis yphc gtpase in2 complex with gdp
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260.........270..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  LNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTA
Query Conservation 
  
   
  

        
  

 
 


 









 
     
 

   


 
         
  
 
 


Alig confidence 




























































.........









Template Conservation     
   
   
            






 









 
      


     
  .........     



 
Template Sequence  LGDLLDAVAEHFKNIPETKYNEEVIQFCLIGRPNVGKSSLVNAXLGEERVIVSVDTSFTYN. . . . . . . . . QQEFVIVDTA
Template Known Secondary structure  TGGG

SS


TT

STTSSTSTT


T.........TTT
Template Predicted Secondary structure 











































.........


Template SS confidence 















































































   152.......160.........170.........180.........190.........200.........210.. .......220..
 
   273.. ....280.........290.........300.........310.........320.........330.........340..
Predicted Secondary structure 


...





















.......
Query SS confidence 


. . .


































































. . . . . . .
Query Sequence  GLR. . . EASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGE. . . . . . .
Query Conservation 
  ...      
             




 




                      




 

 

   .......
Alig confidence 


...














































...
















.......
Template Conservation 

          
          
  









       
  
   
  ...   
 


 

 

          
Template Sequence  GXRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHE. . . AGKAVVIVVNKWDAVDKDESTXKE
Template Known Secondary structure  T
BTTB



S
STTT


...TT

GGGS


TT
Template Predicted Secondary structure 





















...












Template SS confidence 















































































   232.......240.........250.........260.........270.........280.... .....290.........300........
 
   343......350.........360.........370.........380.........390........
Predicted Secondary structure  .....



















Query SS confidence  . . . . .























































Query Sequence  . . . . . TLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQ
Query Conservation  .....            
 





 

  
   
   
          

  

   
  
Alig confidence  .....























































Template Conservation      
           

 





 

  
   
  
       
 
  

  
      
Template Sequence  FEENIRDHFQFLDYAPILFXSALTKKRIHTLXPAIIKASENHSLRVQTNVLNDVIXDAVAX
Template Known Secondary structure 
GGGTTS


TTT
TTGGGT



Template Predicted Secondary structure 





















Template SS confidence 




























































   309310.........320.........330.........340.........350.........360.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions