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Job DescriptionP25522
Confidence99.65%DateThu Jan 5 11:41:55 GMT 2012
Rank89Aligned Residues176
% Identity17%Templatec2hf9A_
PDB info PDB header:hydrolase, metal binding proteinChain: A: PDB Molecule:probable hydrogenase nickel incorporation PDBTitle: crystal structure of hypb from methanocaldococcus2 jannaschii in the triphosphate form
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200.........210.........220.........230........ .240.........250.........260........
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Query Sequence  NDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAG. . . . . REAAIVTDIAGTTRDVLREHIHIDGMPLHI
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Template Sequence  KDILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAER. . MEKHGAKVVP
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   11........20.........30.........40.........50.........60.........70........ .80........
 
   269270.........280...... ...290.........300.........310.........320.........
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Query Sequence  IDTAGLREASDEVERIGI. . . . . . . . . . . . . . . . . . . ERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLP
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Template Sequence  LNTGKECHLDAHLVGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIM. . . . . . . KTA
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   8990.........100.........110.........120.........130.........140.........150........ .160.
 
   330.........340. ........350.........360.........370........
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Query Sequence  ITVVRNKADITG. . . . . . . . . ETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGF
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Template Sequence  DLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSVKE
Template Known Secondary structure  S
GGGT


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   162.......170.........180.........190.........200.........210.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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