Job Description P25522 Confidence 99.66% Date Thu Jan 5 11:41:55 GMT 2012 Rank 81 Aligned Residues 141 % Identity 20% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Sequence		A	N	V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	G	K	K	.	.	.	.	.	.	.	.	.	G	T	S	S	D	I	T	X	Y	N	N	D	K	E	G	R	N	X	V	F	V	D	A	H	S	Y	P	K	T	.	.	.	.	.	.	.	.	L	K	S	L	I	T	A	L	N	I	S
Template Known Secondary structure									S	T	T	S	S							T	T	S			.	.	.	.	.	.	.	.	.				S	S	S							S	S	S	S								T	T	T	T	T		.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.													350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	T	L	G	M	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	N	G	H	A	L	I	R	L	S	A	R	T	G	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence																									.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																									.	.	.
Template Sequence		D	I	A	V	L	C	I	P	P	Q	G	L	D	A	H	T	G	E	C	I	I	A	L	.	.	.	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	H	X	H	A	I	D	E	L	K	A	K	L	K	V	I	T	S	G	T	V	L	Q	D	W	E	C	I	S	L	N	T	N	K	S	A	K
Template Known Secondary structure		S								T	T														.	.	.			T	T											G	G	G	S																T	T	T	S	T	T	T	T										T	T	S	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
					363	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		N	P	F	E	G	V	D	E	L	K	A	R	I	N	E	V	A	E
Template Known Secondary structure		S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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