Job Description P25522 Confidence 99.22% Date Thu Jan 5 11:41:55 GMT 2012 Rank 244 Aligned Residues 141 % Identity 18% Template c2efhD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small gtp-binding protein-like; PDBTitle: ara7-gdp/atvps9a(d185n) Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Sequence		A	K	L	V	L	L	G	D	V	G	A	G	K	S	S	L	V	L	R	F	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	F	S	Q	T	L	A	V	N	D	A	T	V	K	F	E	I	W	D	T	A	G	Q	E	R	Y	H	S	L	A	P	M	Y	Y	.	.	.	.	.	.	R	G	A
Template Known Secondary structure										T	T	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T													S	G	G	G	G	G	G						.	.	.	.	.	.	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.															.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.								.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.																		.	.	.	.	.	.	.
Query SS confidence																														.																		.	.	.	.	.	.	.
Query Sequence		D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	.	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	.	.	.	.	.	.	.	E	T	L	G	M	S	E	V	N	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L
Query Conservation																														.																		.	.	.	.	.	.	.
Alig confidence																														.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	I	I	V	F	D	V	T	N	Q	A	S	F	E	R	A	K	K	W	V	Q	E	L	Q	A	Q	G	N	P	N	M	V	M	A	L	A	G	N	K	S	D	L	L	D	A	R	K	V	T	A	E	D	A	Q	T	Y	A	Q	E	N	G	L	F	F	M	E	T	S	A	K	T	A	T	N	V	K	E	I
Template Known Secondary structure		S								T	T																			S		T	T										T	T			T	T			S												T	T								T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		369	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	H	L	K	Q	S	M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	E	I	A	R	R	L	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions