Job Description P25522 Confidence 100.00% Date Thu Jan 5 11:41:55 GMT 2012 Rank 6 Aligned Residues 304 % Identity 20% Template c2e87A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1320; PDBTitle: crystal structure of hypothetical gtp-binding protein ph1320 from2 pyrococcus horikoshii ot3, in complex with gdp Resolution 2.35 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																														.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		W	F	P	G	P	N	S	F	T	G	E	D	V	L	E	L	Q	G	H	G	G	P	V	I	L	D	L	L	.	.	.	.	.	.	L	K	R	I	L	T	I	P	G	L	R	I	A	R	P	G	E	F	S	E	R	A	F	L	N	.	.	.	.	.	.	.	.	D	K	L	D	L	A	Q	A	E	A	I	A	D
Query Conservation																														.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	R	X	P	T	V	L	T	A	D	E	L	I	D	K	A	F	R	R	A	E	K	A	A	S	S	F	K	P	R	G	N	K	V	K	K	A	R	L	R	E	E	L	R	V	R	T	V	S	N	V	V	R	D	N	L	R	K	V	L	E	R	T	P	G	L	S	T	L	P	K	F	Y	Q	E	L	V	D	V
Template Known Secondary structure		T	T	T																								T					S	S																															S			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	A	S	S	E	Q	A	A	R	S	A	L	N	S	L	Q	G	A	F	S	A	R	V	N	H	L	V	E	A	L	T	H	L	R	I	Y	V	E	A	A	I	D	F	P	D	E	E	I	D	F	L	S	D	G	K	I	E	A	Q	L	N	D	V	I	A	D	L	D	A	V	R	A	E	A	R	Q	G	S
Query Conservation
Alig confidence																			.	.	.	.																									.	.
Template Conservation																			.	.	.	.																									.	.
Template Sequence		L	V	D	R	D	T	F	H	K	A	X	A	G	I	D	W	A	.	.	.	.	I	R	I	I	R	E	L	E	E	R	Y	V	E	R	I	R	Y	S	N	D	P	N	E	I	.	.	A	E	L	R	R	Q	F	Y	G	R	V	A	S	V	L	R	D	I	D	D	R	L	R	Y	L	N	K	A	R	E	V	L	K
Template Known Secondary structure																			.	.	.	.																	T								.	.																		T														G	G
Template Predicted Secondary structure																			.	.	.	.																									.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		212	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.																																																															.
Query SS confidence					.	.	.	.																																																															.
Query Sequence		L	L	R	.	.	.	.	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	.	A	S	D	E	V	E	R	I	G	I
Query Conservation					.	.	.	.																																																															.
Alig confidence					.	.	.	.																												.																																			.
Template Conservation																																				.
Template Sequence		D	L	P	V	V	D	L	E	I	P	T	V	V	I	A	G	H	P	N	V	G	K	S	T	L	L	K	A	L	T	T	A	K	P	.	E	I	A	S	Y	P	F	T	T	R	G	I	N	V	G	Q	F	E	D	G	Y	F	R	Y	Q	I	I	D	T	P	G	L	L	D	R	P	I	S	E	R	N	E	I	E	K
Template Known Secondary structure		G	S					S	S	S								S	T	T	S	S										S	S			.						T	T		S	S										T	T									T	T	T	S	S	S		S	T	T	S
Template Predicted Secondary structure																																				.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																															.	.	.	.	.
Query SS confidence																											.	.																															.	.	.	.	.
Query Sequence		E	R	A	W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	.	.	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	.	.	.	.	.	E	T	L	G	M	S	E	V	N	G	H	A	L	I	R	L	S	A
Query Conservation																											.	.																															.	.	.	.	.
Alig confidence																											.	.																															.	.	.	.	.
Template Conservation
Template Sequence		Q	A	I	L	A	L	R	Y	L	G	N	L	I	I	Y	I	F	D	P	S	E	H	C	G	F	P	L	E	E	Q	I	H	L	F	E	E	V	H	G	E	F	K	D	L	P	F	L	V	V	I	N	K	I	D	V	A	D	E	E	N	I	K	R	L	E	K	F	V	K	E	K	G	L	N	P	I	K	I	S	A
Template Known Secondary structure						G	G	G	G	T		S								T	T		T	T	S	S																T	T	T	S									T	T	T																T	T							B	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	G	T	G	I	D	L	V	K	E	E	I	I	K	T	L
Template Known Secondary structure		T	T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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