Return to main results Retrieve Phyre Job Id

Job DescriptionP25522
Confidence96.99%DateThu Jan 5 11:41:55 GMT 2012
Rank320Aligned Residues115
% Identity21%Templatec2d2fA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:sufc protein; PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240.........250.........260.....
Predicted Secondary structure 


























...........................
Query SS confidence 




















































. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  LREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
  

 
 


 









 
     
 

   


 
         
  ...........................
Alig confidence 




























..........













...........................
Template Conservation 
  

   


 








  
 
   ..........     
 
   
  
            
             
Template Sequence  VPKGEVHALMGPNGAGKSTLGKILAGDPE. . . . . . . . . . YTVERGEILLDGENILELSPDERARKGLFLAFQYPVEVPGV
Template Known Secondary structure  TT

SSSSST
TT..........
TT
TTS
TTB






TT

S
Template Predicted Secondary structure 









..........

































Template SS confidence 















































































   26...30.........40.........50.... .....60.........70.........80.........90.....
 
   266...270.........280. ........290.........300.........
Predicted Secondary structure  .................................








...






Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .















. . .



























Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LHIIDTAGLREASDEV. . . ERIGIERAWQEIEQADRVLFMVDGTTTD
Query Conservation  .................................
 
 



        ...
             




 




   
Alig confidence  .................................















...



















.






Template Conservation 

   
                                          

 
   

 




   
 



.


   
Template Sequence  TIANFLRLALQAKLGREVGVAEFWTKVKKALELLDWDESYLSRYLNEGFSGGEKKRNEILQLLVLEPTYAVL. DETDSGL
Template Known Secondary structure  BTS


T

GGGGGSBTTTT



S.
GGGTT
Template Predicted Secondary structure 









































.






Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150.........160....... ..170....
 
   310.........320.........330........
Predicted Secondary structure 







Query SS confidence 




























Query Sequence  AVDPAEIWPEFIARLPAKLPITVVRNKAD
Query Conservation                     




 

 
Alig confidence 




























Template Conservation 
      
   
  
     


 


  
Template Sequence  DIDALKVVARGVNAMRGPNFGALVITHYQ
Template Known Secondary structure 

BTTBSSS
Template Predicted Secondary structure 





Template SS confidence 




























   175....180.........190.........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions