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Job DescriptionP25522
Confidence98.33%DateThu Jan 5 11:41:55 GMT 2012
Rank289Aligned Residues119
% Identity23%Templatec2bcjQ_
PDB info PDB header:transferase/hydrolaseChain: Q: PDB Molecule:g alpha i1, guanine nucleotide-binding protein g(q), alpha PDBTitle: crystal structure of g protein-coupled receptor kinase 2 in complex2 with galpha-q and gbetagamma subunits
Resolution3.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240........
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Query Sequence  MKVVIAGRPNAGKSSLLNALAGREAAIVTDIA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVE
Template Known Secondary structure  STTSSTSS


TT


SSTTTS
ST
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   40.........50.........60.........70.........80.........90.........100.........110.........
 
   249250.........260....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTTRDVLREHIHIDGM
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Template Sequence  KVSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPSYLPTQQDVLRVRVPTTGIIEYPFDLQSV
Template Known Secondary structure  T




STTTSS


TTTTTSTT









S

SS
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   120.........130.........140.........150.........160.........170.........180.........190.........
 
   265....270.........280.........290.........300....... ..310.........320... ......330..
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Query Sequence  PLHIIDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTT. . . . . . . . . . . TDAVDPAEIWPEFIAR. LPAKLPITV
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Template Sequence  IFRMVDVGGQRSER. . . . . . . . RKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVIL
Template Known Secondary structure 


STTGG........GGGGGG
SS
SGGGGG
B
SS
TTSB
GGGSSS
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   200.........210... ......220.........230.........240.........250.........260.........270.
 
   333......340...
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Query Sequence  VRNKADITGET
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Template Sequence  FLNKKDLLEEK
Template Known Secondary structure 
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   272.......280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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