Job Description P25522 Confidence 98.65% Date Thu Jan 5 11:41:55 GMT 2012 Rank 273 Aligned Residues 119 % Identity 16% Template c2b92A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: crystal-structure of the n-terminal large gtpase domain of human2 guanylate binding protein 1 (hgbp1) in complex with gdp/alf3 Resolution 3.20 Å

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																								.	.																						.	.	.
Query SS confidence																								.	.																						.	.	.
Query Sequence		V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	.	.	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	.	.	.	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I
Query Conservation																								.	.																						.	.	.
Alig confidence																								.	.																						.	.	.
Template Conservation
Template Sequence		V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	G	K	K	K	G	F	S	L	G	S	T	V	Q	S	H	T	K	G	I	W	M	W	C	V	P	H	P	K	K	P	G	H	I	L	V	L	L	D	T	E	G	L	G	D	V	E	K	G	D	N	Q	N	D	S	W	I	F	A	L	A	V
Template Known Secondary structure							B	S	S	S	S									T	T		S	S	S	S					S	S	S					S									S	S	S	T	T											B	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.									.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	.	.	.	.	.	.	.	.	K	L	P	I	T	V	V	R	N	K	A	D	I
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence													.	.																					.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		L	L	S	S	T	F	V	Y	N	S	I	.	.	G	T	I	N	Q	Q	A	M	D	Q	L	Y	Y	V	T	E	L	T	H	R	I	R	S	K	S	V	S	F	F	P	D	F	V	W	T	L	R	D	F	S	L
Template Known Secondary structure					S								.	.	S	S																											S									S			S
Template Predicted Secondary structure													.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions