Job Description P25522 Confidence 98.71% Date Thu Jan 5 11:41:55 GMT 2012 Rank 268 Aligned Residues 212 % Identity 21% Template c1zu4A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212 Resolution 1.95 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																												.	.	.	.	.	.
Query SS confidence																			.	.	.	.																																												.	.	.	.	.	.
Query Sequence		S	S	E	Q	A	A	R	S	A	L	N	S	L	Q	G	A	F	.	.	.	.	S	A	R	V	N	H	L	V	E	A	L	T	H	L	R	I	Y	V	E	A	A	I	D	F	P	D	E	E	I	D	F	L	S	D	G	K	I	E	A	Q	L	N	D	.	.	.	.	.	.	V	I	A	D	L	D	A	V	R	A
Query Conservation																			.	.	.	.																																												.	.	.	.	.	.
Alig confidence																			.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	A	F	N	F	S	K	D	I	K	K	L	S	K	K	Y	K	Q	A	D	D	E	F	F	E	E	L	E	D	V	L	I	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	G	M	K	M	V	L	K	V	S	N	L	V	R	K	K	T	K	R	D	T	S	F	E	N	I	K	D	A	L	V
Template Known Secondary structure																	T					S														T	.	.	.	.	.	.	.	.	.	.	.	.	.	T																			T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.														.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		206	.	.	.	210	.	.	.	.	.	.	.												.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.							.	.	240	.	.	.	.	.	.	.	.															.	250	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	R	Q	G	S	L	L	R	E	G	M	.	.	.	.	.	.	.	.	.	.	.	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	.	.	.	.	.	.	G	R	E	A	A	I	V	T	D	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	R	D	V
Query Conservation														.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	L	Y	Q	A	Y	T	D	N	D	W	Y	R	I	D	F	K	E	N	R	L	N	I	F	M	L	V	G	V	N	G	T	G	K	T	T	S	L	A	K	M	A	N	Y	Y	A	E	L	G	Y	K	V	L	I	A	A	A	D	T	F	R	A	G	A	T	Q	Q	L	E	E	W	I	K	T	R	L	N	N	K
Template Known Secondary structure											S									T	T	S								S	S	T	T	S	S															T	T											S													T	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		255	.	.	.	.	260	.	.																				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		L	R	E	H	I	H	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	.	.	.	.	.	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																						.	.	.	.	.															.
Template Conservation																																								.																																									.
Template Sequence		V	D	L	V	K	A	N	K	L	N	A	D	P	A	S	V	V	F	D	A	I	K	K	A	K	E	Q	N	Y	D	L	L	L	I	D	T	A	G	.	R	L	Q	N	K	T	N	L	M	A	E	L	E	K	M	N	K	I	I	Q	Q	V	E	K	S	A	P	H	E	V	L	L	V	I	D	A	T	T	G	Q	.
Template Known Secondary structure								S	S	T	T																	T	T		S									.		G	G	G																	T	T		T	T			S								G	G	G	T		.
Template Predicted Secondary structure																																								.																																									.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	.	.	.	I	T	G	E	T	L	G	M	S	E	V	N	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V	D	V	L
Query Conservation																														.	.	.
Alig confidence		.	.	.	.																									.	.	.																					.	.
Template Conservation		.	.	.	.																																																.	.
Template Sequence		.	.	.	.	N	G	V	I	Q	A	E	E	F	S	K	V	A	D	V	S	G	I	I	L	T	K	M	D	S	T	S	K	G	G	I	G	L	A	I	K	E	L	L	N	I	P	I	K	M	I	G	.	.	V	G	E	K	V	D	D	L
Template Known Secondary structure		.	.	.	.										T	T	T	S										G	G	G		S		T	T																		.	.		S	S	S	T	T
Template Predicted Secondary structure		.	.	.	.																																																.	.
Template SS confidence
						333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions