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Job DescriptionP25522
Confidence97.19%DateThu Jan 5 11:41:55 GMT 2012
Rank312Aligned Residues112
% Identity27%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240.........250.........260..... ....270.....
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Query Sequence  LREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP. . . . . . . . . . . LHIIDTAGLR. . . . . .
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Template Sequence  IREGEMVGLLGPSGSGKTTILRLIAGLER. . . . . . . . . . . . PTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVY
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TT

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STT
TT

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   38.40.........50.........60...... ...70.........80.........90.........100.....
 
   276...280.........290.........300.........310.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIW
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Template Sequence  DNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELR
Template Known Secondary structure  TTGGGTT

TT
GGGTTS
GGGS
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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   318.320.........330......
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Query Sequence  PEFIARLPAKLPITVVRNK
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Template Sequence  TFVRQVHDEMGVTSVFVTH
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   186...190.........200....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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