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Job DescriptionP25522
Confidence100.00%DateThu Jan 5 11:41:55 GMT 2012
Rank4Aligned Residues114
% Identity43%Templatec1xzqB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30....... ..40.........50.........60.........70.........80..
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Query Sequence  DTIVAQATPPGRGGVGILRISGFKAREVAETVL. . GKLPKPRYADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQ
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Template Sequence  DTIVAVATPPGKGAIAILRLSGPDSWKIVQKHLRTRSKIVPRKAIHGWIHEN. GEDVDEVVVVFYKSPKSYTGEDMVEVM
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Query Sequence  GHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
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Template Sequence  CHGGPLVVKKLLDLFLK. SGARMAEPGEFTKRAFLNGK
Template Known Secondary structure  S
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   81........90....... ..100.........110.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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