Job Description P25522 Confidence 99.83% Date Thu Jan 5 11:41:55 GMT 2012 Rank 32 Aligned Residues 160 % Identity 22% Template c1wb1C_ PDB info PDB header:protein synthesis Chain: C: PDB Molecule:translation elongation factor selb; PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp Resolution 3.0 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.							240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	.	.	.	.	.	.	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.
Template Sequence		K	N	I	N	L	G	I	F	G	H	I	D	H	G	K	T	T	L	S	K	V	L	T	E	I	A	S	T	S	A	H	D	K	L	P	E	S	Q	K	R	G	I	T	I	D	I	G	F	S	A	F	K	L	E	N	Y	R	I	T	L	V	D	A	P	G	H	.	.	.	.	.	.	.	.	A	D	L	I	R	A
Template Known Secondary structure		B										T	T	S	S	T	T							T	T	T	S	S		S	S		S	S	S	S	T	T	T	T	S						S	S							T	T									S	S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.														350	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	Q	E	I	E	Q	A	D	R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	T	L	G	M	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	H	A	L	I
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.
Template Sequence		V	V	S	A	A	D	I	I	D	L	A	L	I	V	V	D	A	K	E	G	P	K	T	Q	T	G	E	H	M	L	I	.	.	.	L	D	H	F	N	I	P	I	I	V	V	I	T	K	S	D	N	A	G	T	E	E	I	K	R	T	E	M	I	M	K	S	I	L	Q	S	T	H	N	L	K	N	S	S	I	I
Template Known Secondary structure					S		S	S										T	T	T													.	.	.				T	T											T	T	S																			S	S	G	G	G	G
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	A	R	T	G	E	G	V	D	V	L	R	N	H	L	K	Q	S	M	G	F	D	T	N	M	E	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	S	A	K	T	G	F	G	V	D	E	L	K	N	L	I	I	T	T	L	N	N	A	E	I	I	R	N	T
Template Known Secondary structure					T	T	T	T	T	T													T	T	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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