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Job DescriptionP25522
Confidence99.70%DateThu Jan 5 11:41:55 GMT 2012
Rank70Aligned Residues141
% Identity23%Templatec1mj1A_
PDB info PDB header:ribosomeChain: A: PDB Molecule:elongation factor tu; PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome
Resolution13.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240........ .250.........260.........270.......
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Query Sequence  REGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIA. . . . . . . . . . . . . . . . GTTRDVLREHIHIDGMPLHIIDTAGLREA
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Template Sequence  KRHVNVGTIGHVDHGKTTLTAALTYVAAAENRNVEVKDYGDIDKAREERARGITINTAHVEYETAKRHYSHVDCRGHADY
Template Known Secondary structure  S
STTSSSTT




S
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S

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SGGG
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   278.280.........290.........300.........310.........320......... 330.........340.........
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Query Sequence  SDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLP. ITVVRNKADITGETLGMSEV. . . . . . .
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Template Sequence  I. . . . . . . . KNMITGAAQMDGAILVVSAADGRMRQTREHILL. . . ARQVGVRYIVVFMNKVDMVDDRELLDLVEMEVRDL
Template Known Secondary structure  ........TT
SSTTT
S
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GGG


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   89 90.........100.........110.........120.. .......130.........140.........150.......
 
   350.........360.....
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Query Sequence  . . . . . . . . NGHALIRLSARTGEGV
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Template Sequence  LNQYEFRGDEVRVIRGSALLALEE
Template Known Secondary structure  TTS
TTTS


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   158.160.........170.........180.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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