Job Description P25522 Confidence 99.47% Date Thu Jan 5 11:41:55 GMT 2012 Rank 158 Aligned Residues 145 % Identity 20% Template c1m2oD_ PDB info PDB header:protein transport/signaling protein Chain: D: PDB Molecule:gtp-binding protein sar1; PDBTitle: crystal structure of the sec23-sar1 complex Resolution 2.50 Å

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A	D
Query Conservation
Alig confidence																																					.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		K	L	L	F	L	G	L	D	N	A	G	K	T	T	L	L	H	M	L	K	N	D	R	L	A	T	L	Q	P	T	W	H	P	T	S	.	.	.	.	E	E	L	A	I	G	N	I	K	F	T	T	F	D	L	G	G	H	I	Q	A	R	R	L	.	.	.	.	.	.	.	.	W	K	D	Y	F	P	E	V	N
Template Known Secondary structure								S	T	T	S	S										T	S										S				.	.	.	.						S	S	S										S	S	G	G	G	G	T	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																					.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.											350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																														.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	L	F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	.	.	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E	T	L	G	M	S	E	V	.	.	.	.	.	.	.	.	.	.	N	G	H	A	L	I	R	L	S	A	R	T	G	E	G	V
Query Conservation																														.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	V	F	L	V	D	A	A	D	P	E	R	F	D	E	A	R	V	E	L	D	A	L	F	N	I	A	E	L	K	D	V	P	F	V	I	L	G	N	K	I	D	A	P	N	A	V	S	E	A	E	L	R	S	A	L	G	L	L	N	T	T	G	R	P	V	E	V	F	M	C	S	V	V	M	R	N	G	Y
Template Known Secondary structure									T	T		G	G	G													T		G	G	G	T	T			B			B				T	T	S	T	T											T	T		S	S						B			B			B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		366	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	R	N	H	L	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	F	Q	W	L	S	Q
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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