Return to main results Retrieve Phyre Job Id

Job DescriptionQ46905
Confidence4.37%DateThu Jan 5 12:35:43 GMT 2012
Rank79Aligned Residues7
% Identity71%Templatec3nb3C_
PDB info PDB header:virusChain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components
Resolution19.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80......
Predicted Secondary structure 




Query SS confidence 






Query Sequence  GITYRFG
Query Conservation 

    
Alig confidence 






Template Conservation 

 
 

Template Sequence  GVSYRFG
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 






   165....170.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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