Return to main results Retrieve Phyre Job Id

Job DescriptionP04983
Confidence97.85%DateThu Jan 5 10:58:31 GMT 2012
Rank103Aligned Residues150
% Identity11%Templated1tf7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  VYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREF
Query Conservation 
  

   


 








  
 
      
 
   
               
  
 
   
    

 


      
Alig confidence 




















































............










....
Template Conservation 
  
   

 
  




 
           
  
  

 
     
      ............ 
 
       ....
Template Sequence  FFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYS. . . . . . . . . . . . WGMDFEEMERQ. . . .
Template Known Secondary structure  SS

TTSSTTT

SSS
T............TS

T....
Template Predicted Secondary structure 
















............




....
Template SS confidence 















































































   278.280.........290.........300.........310.........320.........330 .........340.
 
   107..110.........120.........130.........140.........150.........160.........170 .........180..
Predicted Secondary structure 



















....


Query SS confidence 































































. . . .











Query Sequence  VNRFGKIDWKTMYAEADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTD. . . . ALTDTETESLFR
Query Conservation                     
  
 
          








 

 

   
 







 .... 

      
  
Alig confidence  .......................








































....











Template Conservation  .......................                     
           





  
               
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . NLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIG
Template Known Secondary structure  .......................TS



GGGS
TT

S
TSSS
Template Predicted Secondary structure  .......................

















Template SS confidence 















































































   342.......350.........360.........370.........380.........390........
 
   183......190.........200... ......210.....
Predicted Secondary structure 



..........



Query SS confidence 




















. . . . . . . . . .











Query Sequence  VIRELKSQGRGIVYISHRMKE. . . . . . . . . . IFEICDDVTVFR
Query Conservation   
  
   
 


 


    ..........     
 
  
 
Alig confidence 




















..........











Template Conservation 
          


                      
 

 
 
Template Sequence  VTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQ
Template Known Secondary structure  TT

SSSS


SS
SS

TTT
S
Template Predicted Secondary structure 



















Template SS confidence 










































   399400.........410.........420.........430.........440.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions