Return to main results Retrieve Phyre Job Id

Job DescriptionP04983
Confidence100.00%DateThu Jan 5 10:58:31 GMT 2012
Rank48Aligned Residues223
% Identity26%Templated1pf4a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.... .....20.........30.........40.........50.........60.........70........
Predicted Secondary structure 


..




























Query SS confidence 













. .































































Query Sequence  MEALLQLKGIDKAF. . PGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLGKETTFTGPKSSQE
Query Conservation 
   
    

   ..     
  

  
  

   


 








  
 
      
 
   
             
Alig confidence 













..































































Template Conservation      
   


         

  


 
  

   
 
 








  
 
      
 
   
             
Template Sequence  VNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRR
Template Known Secondary structure 

SS
SS

TT





TT






S
SSTSSSS

SSS








SSTTS


Template Predicted Secondary structure 




























Template SS confidence 















































































   338.340.........350.........360.........370.........380.........390.........400.........410.......
 
   7980.........90.........100.........110.........120......... 130.........140.........150......
Predicted Secondary structure 

















..










Query SS confidence 


















































. .


























Query Sequence  AGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEADKLLAKL. . NLRFKSDKLVGDLSIGDQQMVEIAKVL
Query Conservation    
  
 
   
    

 


                         
  
.. 
          








 

 

Alig confidence 
.












.


































..


























Template Conservation   .
  
 
   
   .

 


                                
          

 
  


 




Template Sequence  H. FALVSQNVHLFND. TIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARAL
Template Known Secondary structure  B.


S



SS.
TTTSS



GGGGGGSS

SS

TTT
Template Predicted Secondary structure  .






.
























Template SS confidence 















































































   418 .420.........430. ........440.........450.........460.........470.........480.........490.....
 
   157..160.........170.........180.........190.........200.........210.........220.......
Predicted Secondary structure 



















Query SS confidence 






































































Query Sequence  SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVAS
Query Conservation     
 







  

      
   
  
   
 


 


         
 
  
  
 

       
Alig confidence 































.














.





















Template Conservation     
 







 


      
   
    .   


 


     .   
 
  
  
 

  
   
Template Sequence  LRDAPVLILDEATSALDTESERAIQAALDELQ. KNKTVLVIAHRLSTI. EQADEILVVDEGEIIERGRHAD
Template Known Secondary structure  TB
S
S



S


TT
.SS





S


GGG.G



SS
SSS


Template Predicted Secondary structure 









.




.








Template SS confidence 






































































   496...500.........510.........520....... ..530.........540.. .......550.........560....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions