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Job DescriptionP04983
Confidence100.00%DateThu Jan 5 10:58:31 GMT 2012
Rank3Aligned Residues442
% Identity20%Templatec3ozxA_
PDB info PDB header:hydrolase, translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain)
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10..... ....20.........30.........40.........50.........60.........70.........80......
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Query Sequence  KGIDKAFP. GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLGKETTFTGPKSSQEAGIGIIHQ
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Template Sequence  GEVIHRYKVNGFKLFGLP. TPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDP. . NSKVGKDEVLKRFRGKEIYNYFK
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SSTTS



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TT

TTSSTTSS


TT
T..TS


TTSTT
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   77..80.........90.... .....100.........110.........120.........130 .........140.........150...
 
   87. .90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EL. . . . . NLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESK
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Template Sequence  ELYSNELKIVHKIQYVEYASKFLK. GTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREAD
Template Known Secondary structure  TT



S
TTGGGTT

.SB

SS
TT
GGGTTSBGGG

S

S
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   154.....160.........170....... ..180.........190.........200.........210.........220.........230..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRK
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Template Sequence  VYIFDQPSSYLDVRERMNMAKAIRELL. KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGY
Template Known Secondary structure  STTTT


.TTS
S

STTT


T
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   233......240.........250......... 260.........270.........280.........290.........300.........310.
 
   242.......250.........260... ......270.........280.........290.........300.........310.
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Query Sequence  LEDQYPHLDKAPGDIRLKVDNL. . . . . . . . . . CGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTL
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Template Sequence  LPAENMKIRPDEIKFMLKLKTKMKWTKIIKKLGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTP
Template Known Secondary structure  TTTT
SSS



S





TT

TT


TTSSTTSS

SB

S
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   312.......320.........330.........340.........350.........360.........370.........380.........390.
 
   312.......320.........330.........340.........350.........360.........370.........380.........390.
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Query Sequence  DGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQ
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Template Sequence  EKQI. . . . . . . . . . . . . LSYKPQRIF. . . PNYDGTVQQYLENASKDALSTS. . . . . . . . . SWFFEEVTKRLNL. HRLLES
Template Known Secondary structure  S


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SSB
SSTT
TT.........STTTTTTG.GG
TTS
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   402... ....410.... .....420.........430...... ...440......... 450.....
 
   392.......400.........410.........420.........430.........440.... .....450.........460.........470
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Query Sequence  AIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAD. GLSIILVSSEMPEVLGMSDRIIVMHE
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Template Sequence  NVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFK.
Template Known Secondary structure  BGGG

S

SSTTTT

TT

S

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   456...460.........470.........480.........490.........500.........510.........520.........530....
 
   471........480.
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Query Sequence  GHLSGEFTREQ
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Template Sequence  GEPEKAGLATS
Template Known Secondary structure  TTT

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   535....540.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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