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Job DescriptionP04983
Confidence100.00%DateThu Jan 5 10:58:31 GMT 2012
Rank10Aligned Residues302
% Identity25%Templatec2yyzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar abc transporter, atp-binding protein; PDBTitle: crystal structure of sugar abc transporter, atp-binding protein
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  ALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLGKETTFTGPKSSQEAGIG
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Template Sequence  PSIRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPP. . . KYREVG
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   2.......10.........20.........30.........40.........50.........60.........70.. ......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  IIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKV
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Template Sequence  MVFQNYALYPHMTVFENIAFPLRARR. . . . ISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKV
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   7980.........90.........100.... .....110.........120.........130.........140.........150....
 
   163......170.........180....... ..190.........200.........210.........220.........230. .......
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Query Sequence  IIMDEPTDALTDTETESLFRVIREL. KSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTED. . . SLIEMMV
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Template Sequence  LLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFI
Template Known Secondary structure  STTTTS


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   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   239240.........250. ........260.........270.........280.....
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Query Sequence  GRKLEDQYPHLDK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . APGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSG
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Template Sequence  GNPPTNFLRDFSVSVENKQTILKRDDVIIKLPEPVDVKLKEVVVGIRPEHCRISRERVENSIPGVVYVVEPLGRDIIVNV
Template Known Secondary structure  SSS

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   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   286...290.........300.........310.
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Query Sequence  LMGAGRTELMKVLYGALPRTSGYVTL
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Template Sequence  KTEKGEIIKVFGDTGKAPQPGENVFL
Template Known Secondary structure  TTS


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   315....320.........330.........340
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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