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Job DescriptionP04983
Confidence97.49%DateThu Jan 5 10:58:31 GMT 2012
Rank123Aligned Residues150
% Identity13%Templatec2q6tB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dnab replication fork helicase; PDBTitle: crystal structure of the thermus aquaticus dnab monomer
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.... .....60.........70.........80.........90.........100.....
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Query Sequence  VYPGRVMALVGENGAGKSTMMKVLTGIY. TRDAGTLLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGRE
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Template Sequence  LGPGSLNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA. . . . . . . . . . . . . . . . . . . . . . . QLTLRMMCSEA
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   197..200.........210.........220.........230.........240.. .......250...
 
   106...110.........120.........130.........140.........150.........160.........170.........180.....
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Query Sequence  FVNRFGKIDWKTMYAEADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIR
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Template Sequence  RIDMNRVRLTDRDFSRLVDVASRLSEAPIYIDDTPDLTLMEVRARARRLVSQNQVGLIIIDYLQLMSGPNRQQEIAAISR
Template Known Secondary structure  T

GGGT


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B

GGG
B


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   254.....260.........270.........280.........290.........300.........310.........320.........330...
 
   186... 190.........
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Query Sequence  ELKS. . . . QGRGIVYISH
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Template Sequence  GLKALARELGIPIIALSQ
Template Known Secondary structure  TS
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   344.....350.........360.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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