Job Description P04983 Confidence 100.00% Date Thu Jan 5 10:58:31 GMT 2012 Rank 56 Aligned Residues 206 % Identity 25% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	A	L	L	Q	L	K	G	I	D	K	A	F	P	G	V	K	A	L	S	G	A	A	L	N	V	Y	P	G	R	V	M	A	L	V	G	E	N	G	A	G	K	S	T	M	M	K	V	L	T	G	I	Y	T	R	D	A	G	T	L	L	W	L	G	K	E	T	T	F	T	G	P	K	S	S	Q	E	A	G
Query Conservation
Alig confidence																		.	.																																								.																						.
Template Conservation																		.	.																																								.																						.
Template Sequence		F	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R	S	I	.
Template Known Secondary structure		T																.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S							T	T	.
Template Predicted Secondary structure																		.	.																																								.																						.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		I	G	I	I	H	Q	E	L	N	L	I	P	Q	L	T	I	A	E	N	I	F	L	G	R	E	F	V	N	R	F	G	K	I	D	W	K	T	M	Y	A	E	A	D	K	L	L	A	K	L	N	L	R	F	K	S	D	K	.	.	.	.	.	L	V	G	D	L	S	I	G	D	Q	Q	M	V	E	I	A	K	V
Query Conservation																																																											.	.	.	.	.
Alig confidence															.															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation															.															.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	I	V	P	Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	K	L	D	A	T	.	.	.	.	.	.	.	.	.	.	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C
Template Known Secondary structure							S	S					S	S	.	B							T	T	S	T	T			.	.	.	.	.	.	.	.	.	.											T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure															.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.											.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	F	E	S	K	V	I	I	M	D	E	P	T	D	A	L	T	D	T	E	T	E	S	L	F	R	V	I	R	E	L	K	S	Q	G	R	G	I	V	Y	I	S	H	R	M	K	E	I	F	E	I	C	D	D	V	T	V	F	R	D	G	Q	F	I	A	E	R	E	V	A	S	L	T	E	D	S
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	.	.	.	.	.	.	.	.	.	.	L	F	Q	K	A	V	E	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N
Template Known Secondary structure				T			S												.	.	.	.	.	.	.	.	.	.																	S	S	G	G	G	S	.	T	T		S							T	T															T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions