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Job DescriptionP04983
Confidence100.00%DateThu Jan 5 10:58:31 GMT 2012
Rank22Aligned Residues277
% Identity21%Templatec1vciA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLGKETTFTGPKSSQEAG
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Template Sequence  MVE. VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPP. . . KDRN
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Query Sequence  IGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFES
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Template Sequence  ISMVFQ. . . . . . HMTVYENIAFPLKK. . . . . . FPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEP
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Query Sequence  KVIIMDEPTDALTDTETESLFRVIREL. KSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTED. . . SLIEM
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Template Sequence  DVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVAT
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Query Sequence  MVGRKLEDQYPHLDKAP. . . . . . . GDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTEL
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Template Sequence  FIGAPEMNILEVSVGDGYLEGRGFRIELPQMDLLKDYVGKTVLFGIRP. EHMTVEGVHMKRTARL
Template Known Secondary structure  SSSS


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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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