Job Description P04983 Confidence 99.27% Date Thu Jan 5 10:58:31 GMT 2012 Rank 78 Aligned Residues 188 % Identity 14% Template c1q57G_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna primase/helicase; PDBTitle: the crystal structure of the bifunctional primase-helicase of2 bacteriophage t7 Resolution 3.45 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	G	V	K	A	L	S	G	A	A	L	N	V	Y	P	G	R	V	M	A	L	V	G	E	N	G	A	G	K	S	T	M	M	K	V	L	T	G	I	Y	T	R	D	A	G	T	L	L	W	L	G	K	E	T	T	F	T	G	P	K	S	S	Q	E	A	G	I	G	I	I	H	Q	E	L	N	L	I	P	Q
Query Conservation
Alig confidence																																																				.	.	.
Template Conservation																																																				.	.	.
Template Sequence		F	S	G	C	T	G	I	N	D	K	T	L	G	A	R	G	G	E	V	I	M	V	T	S	G	S	G	M	V	M	S	T	F	V	R	Q	Q	A	L	Q	W	G	T	A	M	G	K	K	V	G	.	.	.	L	A	M	L	E	E	S	V	E	E	T	A	E	D	L	I	G	L	H	N	R	V	R	L	R	Q	S
Template Known Secondary structure			S	S		T	T										T	T								S	S		S														T	T	T	S						.	.	.				T	T	S														T	T	S			T	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		L	T	I	A	E	N	I	F	L	G	R	E	F	V	N	R	F	G	K	I	D	W	K	T	M	Y	A	E	A	D	K	L	L	A	K	L	N	L	R	F	K	S	D	K	L	V	G	D	L	S	I	G	D	Q	Q	M	V	E	I	.	.	A	K	V	L	S	F	E	S	K	V	I	I	M	D	E	P	T	D	A
Query Conservation																																																													.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	L	K	R	E	I	.	.	.	.	.	.	.	.	.	.	.	.	I	E	N	G	K	F	D	Q	W	F	D	E	L	F	G	N	D	T	F	H	L	Y	D	S	F	E	T	D	R	L	L	A	K	L	A	Y	M	R	S	G	L	G	C	D	V	I	I	L	D	H	I	S	I	V	V	S	A	S	G	E	S
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.			T	S											T	T	T																							T	T			S							T	T				S			S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.													.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.																							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	D	T	E	T	E	S	L	F	R	V	I	R	E	L	K	S	Q	.	G	R	G	I	V	Y	I	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	K	E	I	F	E	I	C	D	D	V	T	V	F	R	D
Query Conservation																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	R	K	M	I	D	N	L	M	T	K	L	K	G	F	A	K	S	T	G	V	V	L	V	V	I	C	H	L	K	N	P	D	K	G	K	A	H	E	E	G	R	P	V	S	I	T	D	L	R	G	S	G	A	L	R	Q	L	S	D	T	I	I	A	L	E	R
Template Known Secondary structure																						T													S	S	S	S		S	T	T						S	T	T		S	S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions