Job Description P0A9F6 Confidence 99.65% Date Thu Jan 5 11:10:04 GMT 2012 Rank 20 Aligned Residues 213 % Identity 15% Template d2fyia1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.80

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		A	R	S	A	K	G	A	L	T	V	S	L	L	P	S	F	A	I	H	W	L	V	P	R	L	S	S	F	N	S	A	Y	P	G	I	D	V	R	I	Q	A	V	D	R	Q	E	D	K	L	A	D	D	V	D	.	.	.	.	V	A	I	F	Y	G	R	G	N	W	P	G	L	R	V	E	K	L	Y	A	E	Y
Query Conservation																																																								.	.	.	.
Alig confidence																																																								.	.	.	.
Template Conservation
Template Sequence		T	N	D	T	S	G	V	L	T	I	A	T	T	H	T	Q	A	R	Y	S	L	P	E	V	I	K	A	F	R	E	L	F	P	E	V	R	L	E	L	I	Q	G	T	P	Q	E	I	A	T	L	L	Q	N	G	E	A	D	I	G	I	A	S	E	R	L	S	N	D	P	Q	L	V	A	F	P	W	F	R	W	H
Template Known Secondary structure			T	T																	T													T	T																				T	S		S					S	S	S	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	L	P	V	C	S	P	L	L	L	T	G	E	K	P	L	K	T	P	E	D	L	A	K	H	T	L	L	H	D	A	S	R	R	D	W	Q	T	Y	T	R	Q	.	L	G	L	N	H	I	N	V	Q	Q	G	P	I	F	S	H	S	A	M	V	L	Q	A	A	I	H	G	Q	G	V	A	L	A	N	N	V	M
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		H	S	L	L	V	P	H	D	H	P	L	T	Q	I	S	P	L	T	L	E	S	I	A	K	W	P	L	I	T	Y	R	Q	G	I	T	G	R	S	R	I	D	D	A	F	A	R	K	G	L	L	A	D	I	V	L	S	A	Q	D	S	D	V	I	K	T	Y	V	A	L	G	L	G	I	G	L	V	A	E	Q	S
Template Known Secondary structure								T	T		G	G	G	T	S	S	S							T	T	S							T	T	S	T	T											T	T										S	S											T	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	S	E	I	E	A	G	R	L	V	C	P	F	N	D	V	L	V	S	K	N	A	F	Y	L	V	C	H	D	S	Q	A	E	L	G	K	I	A	A	F	R	Q	W	I	L	A	K	A	A	A	E	Q	E	K	F	R	F	R
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		S	G	.	E	Q	E	E	E	N	L	I	R	L	D	T	R	H	L	F	D	A	N	T	V	W	L	G	L	K	R	G	Q	L	Q	R	N	Y	V	W	R	F	L	E	L	C	N	A	G	L	S	V	E	D	I	K	R	Q	V	M
Template Known Secondary structure		G	S	.	T	T			T	T							T	T	T	S											T	T																S	S	S
Template Predicted Secondary structure				.
Template SS confidence
		248	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions