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Job DescriptionP0AA67
Confidence1.91%DateThu Jan 5 11:12:03 GMT 2012
Rank98Aligned Residues129
% Identity13%Templatec2bl2F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:v-type sodium atp synthase subunit k; PDBTitle: the membrane rotor of the v-type atpase from enterococcus2 hirae
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  DLTGCALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILSTALPYSL
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Template Sequence  SGIGSAKGVGMTGEAAAALTTSQPEKFGQALILQLLPGTQGLYGFVIAFLIFINLGSDMSVVQGLNFLGASLPIAFTGLF
Template Known Secondary structure  TT
GGGGGGT

TT

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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   226...230.........240.........250.........260.........270....
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Query Sequence  EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIA
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Template Sequence  SGIAQGKVAAAGIQILAKKPEHATKGIIFAAMVETYAILGFVISFLLVL
Template Known Secondary structure 
GGGTT
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   106...110.........120.........130.........140.........150....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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