Job Description P63417 Confidence 99.77% Date Thu Jan 5 12:08:09 GMT 2012 Rank 27 Aligned Residues 135 % Identity 17% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		M	L	I	R	V	E	I	P	I	D	A	P	G	I	D	A	L	L	R	R	S	F	.	.	.	.	.	.	E	S	D	A	E	A	K	L	V	H	D	L	R	E	D	G	F	L	T	L	G	L	V	A	T	D	D	E	G	Q	V	I	G	Y	V	A	F	S	P	V	D	V	Q	G	E	D	L	Q	W	V	G	M
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G	L	R	G	F	V
Template Known Secondary structure		G	G						G	G	G															T	T																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	L	A	V	D	E	K	Y	R	G	Q	G	L	A	R	Q	L	V	Y	E	G	L	D	S	L	N	E	F	G	Y	A	A	V	V	T	L	G	D	P	A	L	Y	S	R	F	G	F	E	L	A	A	H	H	D	L	R	C	R	W	P	G	T	E	S	A	F	Q	V	H	R	L	A	D	D
Query Conservation
Alig confidence																																								.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	G	V	Y	S	R	A	G	F	E	.	.	.	.	.	.	.	.	.	.	.	.	E	S	G	R	X	L	L	G	Q	A	L	A	P	P
Template Known Secondary structure								G	G	G	T	T	S	S																T	T									.	.						T	T			.	.	.	.	.	.	.	.	.	.	.	.											S	S
Template Predicted Secondary structure																																								.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.													130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions