 |
Job Description | P63417 | Confidence | 98.05% | Date | Thu Jan 5 12:08:09 GMT 2012 |
Rank | 145 | Aligned Residues | 102 |
% Identity | 10% | Template | c3dnsA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:ribosomal-protein-alanine acetyltransferase; |
PDBTitle: the n-terminal domain of ribosomal-protein-alanine acetyltransferase2 from clostridium acetobutylicum atcc 824
|
Resolution | 2.10 Å |
|
 |
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
. | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
. | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
Query Sequence |   |
L | T | L | G | L | V | A | T | D | D | E | G | Q | V | I | G | Y | V | A | F | S | P | V | D | V | Q | G | E | D | L | Q | W | V | G | M | A | P | L | A | V | D | E | K | Y | R | G | Q | G | L | A | R | Q | L | V | Y | E | G | L | D | S | L | . |
N | E | F | G | Y | A | A | V | V | T | L | G | . |
. |
. |
. |
D | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
| . |   |   |   |
|   |   |   |
|   |
|   |   | . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |   |   |   |
|   |   |
|
|   |
|   |
|   |   |
|
|   | . | . | . |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
V | E | R | E | Y | L | I | T | D | K | Y | G | I | T | I | G | R | I | F | I | V | D | L | N | K | . |
. |
. |
D | N | R | F | C | X | F | R | X | K | I | Y | K | Q | G | K | S | I | N | T | Y | I | K | E | I | L | S | V | F | X | E | F | L | F | K | S | N | D | I | N | K | V | N | I | I | V | D | E | E | V | S | T |
Template Known Secondary structure |   |
| T | T |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T | T | T |  |  |  |  |  |  |  |  |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  |  |  | T | T | S |
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |
|
|
|
| . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | Y | S | R | F | G | F | E | L | A | A | H | H | . |
. |
D | L | R | C | R | W | P | G | T | E | S | A | F | Q | V | H |
Query Conservation |   |
  |   |
|   |
|   |
|
|   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
Template Sequence |   |
Q | P | F | V | E | L | G | F | A | F | E | G | I | I | N | K | S | I | I | E | K | N | V | L | K | D | E | F | L | F | G | X |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|