|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
M | L | I | R | V | E | I | P | I | D | A | P | G | I | D | A | . |
. |
. |
. |
. |
. |
L | L | R | R | S | F | E | S | D | A | E | A | K | L | V | H | D | L | R | E | D | G | F | L | T | L | G | L | . |
V | A | T | D | D | E | G | Q | V | I | G | Y | V | A | F | S | P | V | D | V | . |
. |
. |
. |
. |
. |
Q | G | E |
Query Conservation |   |
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   | . | . | . | . | . | . |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | S | F | R | H | V | T | X | D | D | V | D | X | L | H | S | W | X | H | E | E | H | V | I | P | Y | W | K | L | N | I | P | L | V | D | Y | K | K | H | L | Q | T | F | L | N | D | D | H | Q | T | L | X | V | G | A | I | N | G | V | P | X | S | Y | W | E | S | Y | W | V | K | E | D | I | I | A | N | Y | Y | P | F |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  | T | T | S | T | T | T |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | G | G | G | S | G | G | G | G | G | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | Q | W | V | G | M | A | P | L | A | V | D | E | K | Y | R | G | Q | G | L | A | R | Q | L | V | Y | E | G | L | D | S | L | . |
N | E | F | G | Y | A | A | V | V | T | L | G | D | P | A | . |
. |
. |
. |
. |
. |
L | Y | S | R | F | G | F | E | L | A | A | H | H | D | L | R | C | R | W | P | G | T | E | S | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
| . |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   | . | . | . | . | . | . |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |
Template Sequence |   |
E | E | H | D | Q | G | I | H | L | L | I | G | P | Q | E | Y | L | G | Q | G | L | I | Y | P | L | L | L | A | I | X | Q | Q | K | F | Q | E | P | D | T | N | T | I | V | A | E | P | D | R | R | N | K | K | X | I | H | V | F | K | K | C | G | F | Q | P | V | K | E | V | E | . |
. |
. |
. |
L | P | D | K | I | G | L |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |  |  |
| S | G | G | G | S | S | S | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |
|
| B | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  | . | . | . | . |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
|
170 | . | . | . | . | . | . |
  |
  |   |
141 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
F | Q | V | H | R |
Query Conservation |   |
  |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
Template Sequence |   |
L | X | K | C | E |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
177 | . | . | 180 | . |
  |