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Job DescriptionP76245
Confidence100.00%DateThu Jan 5 12:21:11 GMT 2012
Rank12Aligned Residues155
% Identity29%Templatec3qyyB_
PDB info PDB header:signaling protein/inhibitorChain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  ALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEV
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Template Sequence  DLKRHALFDPLTEALNRRGCEQAMRDSVTAAQREGWPFVLFVLDMDNLKPINDRFGHLAGDRVLVRLVESAYGWLGAQDW
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   130.........140.........150.........160.........170.........180.........190.........200.........
 
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Query Sequence  IGRLGGDEFLVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHK
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Template Sequence  IGRWGGDEFLIGVHASEDEATLKLNQWLSMLEEAPLHV. . . . . . . . . . . SAGSAVCEVGIDATELYRRADAAMYRAKFSG
Template Known Secondary structure  TT
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   210.........220.........230.........240....... ..250.........260.........270........
 
   329330....
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Query Sequence  QKTPFV
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Template Sequence  GRRLVR
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   284.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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