Job Description P76245 Confidence 98.98% Date Thu Jan 5 12:21:11 GMT 2012 Rank 19 Aligned Residues 163 % Identity 18% Template c3k2nB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:sigma-54-dependent transcriptional regulator; PDBTitle: the crystal structure of sigma-54-dependent transcriptional2 regulator domain from chlorobium tepidum tls Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		Q	I	I	A	R	V	S	Q	S	L	A	K	E	Q	S	L	E	S	L	V	R	Q	L	L	E	M	L	E	M	V	T	D	M	E	S	T	Y	L	T	K	V	D	V	E	A	R	L	Q	H	I	M	F	A	R	N	S	Q	.	K	M	Y	I	P	E	N	F	T	V	S	W	D	Y	S	L	C	K	R	A	I	D
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		K	L	X	Q	Y	I	G	D	A	I	G	T	I	R	D	P	Q	E	L	F	R	T	V	T	D	K	L	R	L	L	F	A	F	D	S	A	V	I	I	T	I	D	R	E	R	R	E	A	S	V	F	F	E	X	L	R	F	E	L	P	E	Q	L	R	H	Q	T	R	S	I	A	G	T	W	L	E	G	H	L	D
Template Known Secondary structure																													T	T	T				S									T	T	T	T										S	S				G	G	G			S					T	T	S	T	T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		E	N	C	F	F	S	.	.	.	.	.	.	.	.	D	E	V	P	D	R	W	G	D	C	I	A	A	R	N	L	G	I	T	T	F	L	S	T	P	I	H	L	P	D	G	S	F	Y	G	T	L	C	A	A	S	S	E	K	R	Q	W	S	E	R	A	E	Q	V	L	Q	L	F	A	G	L	I	A	Q	Y	I
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																											.
Template Conservation																																										.
Template Sequence		D	R	T	V	T	V	A	S	I	A	R	D	I	P	S	F	G	A	D	G	A	P	L	L	W	T	L	H	E	L	G	X	R	Q	I	V	L	S	P	L	.	R	S	G	G	R	V	I	G	F	L	S	F	V	S	A	E	E	K	L	W	S	D	G	D	K	S	L	L	S	G	V	S	S	S	I	A	I	A	V
Template Known Secondary structure				S						T	T	T	S		T	T	T	T	S	T	T										T	T										.			T	T											S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		155	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	E	A	L	V	E	Q	L	R	E	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	A	L	A	Y	E	E	L	R	Q	R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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