Job Description P76245 Confidence 98.43% Date Thu Jan 5 12:21:11 GMT 2012 Rank 41 Aligned Residues 153 % Identity 11% Template c3dbaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cone cgmp-specific 3',5'-cyclic phosphodiesterase subunit PDBTitle: crystal structure of the cgmp-bound gaf a domain from the2 photoreceptor phosphodiesterase 6c Resolution 2.57 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.										.	.	.	.	70	.	.
Predicted Secondary structure																	.																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																																	.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	I	I	A	R	V	S	Q	S	L	A	K	E	Q	.	S	L	E	S	L	V	R	Q	L	L	E	M	L	E	M	V	T	D	M	E	S	T	Y	L	T	K	V	D	V	E	A	R	L	Q	H	I	M	F	A	R	N	S	Q	K	M	Y	I	P	.	.	.	.	.	.	.	.	.	E	N	F	T	V	S	W
Query Conservation																	.																																																	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	N	I	L	F	E	L	L	T	E	I	Q	D	E	A	G	S	M	E	K	I	V	H	K	T	L	Q	R	L	S	Q	L	L	A	A	D	R	C	S	M	F	I	C	R	S	R	N	G	I	P	E	V	A	T	R	L	L	N	V	T	P	T	S	K	F	E	D	N	L	V	N	P	D	K	E	T	V	F	P	L
Template Known Secondary structure												S		S		T	T		T																T												S	S	S	S												T	T							B			G	G	G						T
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		D	Y	S	L	C	K	R	A	I	D	E	N	C	F	F	S	D	E	V	P	D	R	.	.	.	.	W	G	D	C	I	A	A	R	N	L	G	I	T	T	F	L	S	T	P	I	H	L	P	D	G	S	F	Y	G	T	L	C	A	A	S	S	E	K	R	Q	W	S	E	R	A	E	Q	V	L	Q	L	F	A	G
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.
Template Conservation
Template Sequence		D	I	G	I	A	G	W	V	A	H	T	K	K	F	F	N	I	P	D	V	K	K	N	N	H	F	S	D	Y	L	D	K	K	T	G	Y	T	T	V	N	M	M	A	I	P	I	T	Q	G	K	E	V	L	A	V	V	M	A	L	N	K	L	N	A	S	E	F	S	K	E	D	E	E	V	F	K	K	Y	L	N
Template Known Secondary structure		T	S	S									T						S	S	T	T	S	S	T	T																								T	T												S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	Q	Y	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	S	L	V	L	R
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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