Job Description P76245 Confidence 98.72% Date Thu Jan 5 12:21:11 GMT 2012 Rank 28 Aligned Residues 148 % Identity 16% Template c2qybA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:membrane protein, putative; PDBTitle: crystal structure of the gaf domain region of putative membrane2 protein from geobacter sulfurreducens pca Resolution 2.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	S	L	A	K	E	Q	S	L	E	S	L	V	R	Q	L	L	E	M	L	E	M	V	T	D	M	E	S	T	Y	L	T	K	V	D	V	E	A	R	L	Q	H	I	M	F	A	R	N	S	Q	K	M	Y	I	P	E	N	F	T	V	S	W	D	Y	S	L	C	K	R	A	I	D	E	N	C	F	F	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	I	X	N	R	T	L	D	L	Q	I	I	X	D	D	L	L	N	L	L	L	K	E	F	K	L	D	L	A	V	I	R	L	V	D	E	K	G	V	L	R	V	R	S	Y	S	G	K	G	I	A	G	I	A	G	K	D	W	E	P	E	I	E	T	Y	I	G	E	A	F	L	S	N	R	L	Q	F	V	N
Template Known Secondary structure																										S	S		S									T	T	S										S		T	T	S	T	T		S		B				T	T	S									T	S					S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																																								.
Query SS confidence					.	.																																								.
Query Sequence		E	V	P	.	.	D	R	W	G	D	C	I	A	A	R	N	L	G	I	T	T	F	L	S	T	P	I	H	L	P	D	G	S	F	Y	G	T	L	C	A	A	S	S	E	.	K	R	Q	W	S	E	R	A	E	Q	V	L	Q	L	F	A	G	L	I	A	Q	Y	I	Q	K	E
Query Conservation					.	.																																								.
Alig confidence					.	.																																								.
Template Conservation
Template Sequence		D	T	Q	Y	X	T	K	P	L	T	R	E	L	X	Q	K	E	G	I	K	S	F	A	H	I	P	I	S	R	K	G	E	P	P	F	G	I	L	S	V	F	S	R	T	I	V	G	L	F	N	E	P	F	L	N	L	L	E	S	L	A	G	Q	L	A	Q	A	V	K	I	V
Template Known Secondary structure			G	G	G		S											T	T												T	T	S											S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions