Job Description P76245 Confidence 98.28% Date Thu Jan 5 12:21:11 GMT 2012 Rank 44 Aligned Residues 140 % Identity 16% Template c2lb5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor histidine kinase; PDBTitle: refined structural basis for the photoconversion of a phytochrome to2 the activated far-red light-absorbing form Resolution UNK

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																			.	.	.																											.	.
Query SS confidence																																																			.	.	.																											.	.
Query Sequence		L	E	S	L	V	R	Q	L	L	E	M	L	E	M	V	T	D	M	E	S	T	Y	L	T	K	V	D	V	E	A	R	L	Q	H	I	M	F	A	R	N	S	Q	K	M	Y	I	P	E	N	.	.	.	F	T	V	S	W	D	Y	S	L	C	K	R	A	I	D	E	N	C	F	F	S	D	E	V	P	D	.	.
Query Conservation																																																			.	.	.																											.	.
Alig confidence																																																			.	.	.																											.	.
Template Conservation
Template Sequence		L	D	Q	I	L	R	A	T	V	E	E	V	R	A	F	L	G	T	D	R	V	K	V	Y	R	F	D	P	E	G	H	G	T	V	V	A	E	A	R	G	G	E	R	L	P	S	L	L	G	L	T	F	P	A	G	D	I	P	E	E	A	R	R	L	F	R	L	A	Q	V	R	V	I	V	D	V	E	A	Q	S
Template Known Secondary structure																				S									T	T	S										S	S			S				T	T					G	G	G			S									T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
																											94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	G	D	C	I	A	A	R	N	L	G	I	T	T	F	L	S	T	P	I	H	L	P	D	G	S	F	Y	G	T	L	C	A	A	S	S	E	K	R	Q	W	S	E	R	A	E	Q	V	L	Q	L	F	A	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																			.
Template Sequence		R	S	I	S	Q	P	E	S	W	G	L	S	A	R	V	P	L	G	E	P	L	Q	R	P	V	D	P	C	H	V	H	Y	L	K	S	M	G	V	A	S	S	L	V	V	P	L	M	H	H	.	Q	E	L	W	G	L	L	V	S	H	H	A	E	P	R	P	Y	S	Q	E	E	L	Q	V	V	Q	L	L	A	D
Template Known Secondary structure							S	S						S						S		S	S														T	T		S										T	.	T											S
Template Predicted Secondary structure																																																			.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	Q	Y	I	Q	K	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	S	I	A	I	A	Q	A	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions