Job Description P76245 Confidence 98.15% Date Thu Jan 5 12:21:11 GMT 2012 Rank 47 Aligned Residues 162 % Identity 10% Template c1ykdB_ PDB info PDB header:lyase Chain: B: PDB Molecule:adenylate cyclase; PDBTitle: crystal structure of the tandem gaf domains from a cyanobacterial2 adenylyl cyclase: novel modes of ligand-binding and dimerization Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	I	I	A	R	V	S	Q	S	L	A	K	E	Q	S	L	E	S	L	V	R	Q	L	L	E	M	L	E	M	V	T	D	M	E	S	T	Y	L	T	K	V	D	V	E	A	R	L	Q	H	I	M	F	A	R	N	S	Q	K	M	Y	I	P	E	N	F	T	V	S	W	D	Y	S	L	C	K	R	A	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	M	M	K	A	V	K	S	L	S	Q	S	S	L	D	L	E	D	T	L	K	R	V	M	D	E	A	K	E	L	M	N	A	D	R	S	T	L	W	L	I	D	R	D	R	H	E	L	W	T	K	I	T	Q	D	N	G	S	T	K	E	L	R	V	P	I	G	K	G	F	A	G	I	V	A	A	S	G	Q
Template Known Secondary structure													T																				T	T											T	T	T	T									T	T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																					.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	N	C	F	F	S	D	E	V	P	D	R	W	G	D	C	I	A	A	R	N	.	.	.	.	L	G	I	T	T	F	L	S	T	P	I	H	L	P	D	G	S	F	Y	G	T	L	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	S	E	K	R	Q	W	S	E	R
Query Conservation																							.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	N	I	P	F	D	L	Y	D	H	P	D	S	A	T	A	K	Q	I	D	Q	Q	N	G	Y	R	T	C	S	L	L	C	M	P	V	F	N	G	D	Q	E	L	I	G	V	T	Q	L	V	N	K	K	K	T	G	E	F	P	P	Y	N	P	E	T	W	P	I	A	P	E	C	F	Q	A	S	F	D	R	N
Template Known Secondary structure							S		G	G	G	S	T	T	T											T														S	S	S														S	S							G	G	G	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Q	V	L	Q	L	F	A	G	L	I	A	Q	Y	I	Q	K	E	A	L	V	E	Q	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	E	F	M	E	A	F	N	I	Q	A	G	V	A	L	Q	N	A	Q	L	F	A	T	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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