Return to main results Retrieve Phyre Job Id

Job DescriptionP76245
Confidence98.60%DateThu Jan 5 12:21:11 GMT 2012
Rank31Aligned Residues152
% Identity12%Templatec1vhmB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:protein yebr; PDBTitle: crystal structure of an hypothetical protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.... .....40.........50.........60.........70.........80.
Predicted Secondary structure 


.


























Query SS confidence 































.














































Query Sequence  DQIIARVSQSLAKEQSLESLVRQLLEMLEMVT. DMESTYLTKVDVEARLQHIMFARNSQKMYIPENFTVSWDYSLCKRAI
Query Conservation     
  
   
         
  
   
    .      
   
                                    
Alig confidence 































.





















.......

















Template Conservation    

  
  

    

   
      
   
                       .......                  
Template Sequence  ADLNRDFNALMAGETSFLATLANTSALLYERLTDINWAGFYLLEDDTLVLGPFQG. . . . . . . KIACVRIPVGRGVCGTAV
Template Known Secondary structure  TT


SSS
STT.......S



TTS
Template Predicted Secondary structure 















.......











Template SS confidence 















































































   26...30.........40.........50.........60.........70.........80 .........90........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  DENCFFSDEVPDRWGDCIAARNLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALVE
Query Conservation                            
    

                                               
Alig confidence 
















.

















.










































Template Conservation       
 
 
       .        
 
 


   .    


 
       
   
  

  

  

 

 
     
Template Sequence  ARNQVQRIEDVHVFDGH. IACDAASNSEIVLPLVVK. NQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKK
Template Known Secondary structure  TS
S
GGG
TT
.
SS



ST.TSSTT


TSSGGG
Template Predicted Secondary structure 









.











.







Template SS confidence 















































































   99100.........110..... ....120.........130... ......140.........150.........160.........170......
 
   162.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  QL
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  FF
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 

   177.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions