Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE01
Confidence100.00%DateThu Jan 5 11:22:11 GMT 2012
Rank17Aligned Residues141
% Identity24%Templatec3l8uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative rrna methylase; PDBTitle: crystal structure of smu.1707c, a putative rrna methyltransferase from2 streptococcus mutans ua159
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.. .......50.........60.........70.........80
Predicted Secondary structure 



















.







Query SS confidence 








































.





































Query Sequence  LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP. DSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTS
Query Conservation     
 



 
  
 







   

   
 

 
    .   
   
 

   
        
 


     
  

Alig confidence 




























.










.









.......













.......
Template Conservation       


  
  
 




 


 
 
 .  


                 .......          
   .......
Template Sequence  LGRNHVVLFQPQIPANTGNIARTCAATNT. SLHIIRPMGFPIDDKKMYWDLD. . . . . . . VHFYDSLNDFMNIC. . . . . . .
Template Known Secondary structure 


S


T
.S

SS


TTT





.......SS
.......
Template Predicted Secondary structure 












.









.......

.......
Template SS confidence 















































































   15....20.........30.........40... ......50.........60..... ....70.........
 
   81........90.........100.........110.........120....... ..130......... 140.........150........
Predicted Secondary structure 

























.







.




Query SS confidence 














































.











.


















Query Sequence  ARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQK. CHYHVAIAANPE. YSSLNLAMAVQVIAYEVRM
Query Conservation   
                          





 
  


 
 
  .

  
 

    .  




 



 



  
Alig confidence  ...











































.











.


















Template Conservation  ...                           





  


 
 
    
  
 

       




 
 

 


  
Template Sequence  . . . SGKLHLITKFANKTYSDENYDDSEHHYFLFGREDKGLPEEFMRQHSEKALRIPVNDQHVRSLNLSNTVCMIVYEALR
Template Known Secondary structure  ...
S
SS
SSBGGGS


SSS

BTTTBS
TGGGB



TTT
S


Template Predicted Secondary structure  ...

































Template SS confidence 















































































   87..90.........100.........110.........120.........130.........140.........150.........160...
 
   159160
Predicted Secondary structure 
Query SS confidence 

Query Sequence  AW
Query Conservation    
Alig confidence 

Template Conservation 
 
Template Sequence  QQ
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 

   164.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions