Job Description P0AE01 Confidence 89.71% Date Thu Jan 5 11:22:11 GMT 2012 Rank 42 Aligned Residues 141 % Identity 11% Template c3kw2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable r-rna methyltransferase; PDBTitle: crystal structure of probable rrna-methyltransferase from2 porphyromonas gingivalis Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																			.	.	.	.	.																.	.	.	.	.
Query SS confidence																																			.	.	.	.	.																.	.	.	.	.
Query Sequence		Q	N	I	R	I	V	L	V	E	T	S	H	T	G	N	M	G	S	V	A	R	A	M	K	T	M	G	L	T	N	L	W	L	.	.	.	.	.	V	N	P	L	V	K	P	D	S	Q	A	I	A	L	A	.	.	.	.	.	A	G	A	S	D	V	I	G	N	A	H	I	V	D	T	L	D	E	A	L	A	G
Query Conservation																																			.	.	.	.	.																.	.	.	.	.
Alig confidence																																			.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		D	R	I	T	I	A	I	A	P	T	K	Q	S	E	R	X	E	W	X	L	E	K	L	V	E	I	G	V	D	E	V	V	F	I	E	S	E	H	S	E	R	R	R	I	K	A	E	R	L	E	R	I	A	I	S	A	X	K	Q	S	L	K	A	S	F	P	V	I	R	V	N	I	P	I	Q	T	V	I	A	D
Template Known Secondary structure		S										S	S																	S								T	T	S			S																		T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		C	S	L	V	V	G	T	S	A	R	S	R	T	L	P	W	P	M	L	D	P	R	E	C	G	L	K	S	V	A	.	.	.	.	E	A	A	N	T	P	V	A	L	V	F	G	R	E	R	V	G	L	T	N	E	E	L	Q	K	C	H	Y	H	V	A	I	A	A	N	P	E	Y	S	S	L	N	L	A	M	A
Query Conservation																																.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																				.	.	.	.																.
Template Conservation				.	.	.	.	.	.	.	.	.																																							.
Template Sequence		T	P	.	.	.	.	.	.	.	.	.	K	A	A	V	R	L	I	A	Y	V	D	E	A	V	R	G	R	G	Y	P	S	D	F	Y	H	V	G	Q	D	V	L	I	L	I	G	P	E	G	.	D	F	S	P	S	E	V	E	S	A	L	L	A	G	F	A	P	V	S	L	G	E	S	R	L	R	T	E	T	A
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	T	T	S									T	T							G	G	G	T			T	T	S									T	T	.														T								S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		155	.										.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		149	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	V	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	V	A	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions