Job Description P0AE01 Confidence 100.00% Date Thu Jan 5 11:22:11 GMT 2012 Rank 2 Aligned Residues 185 % Identity 41% Template c3ic6A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative methylase family protein; PDBTitle: crystal structure of putative methylase family protein from neisseria2 gonorrhoeae Resolution 2.59 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	N	I	R	I	V	L	V	E	T	S	H	T	G	N	M	G	S	V	A	R	A	M	K	T	M	G	L	T	N	L	W	L	V	N	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	P	D	S	Q	A	I	A	L	A	A	G	A	S	D	V	I	G	N	A	H
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	N	I	R	I	I	L	T	R	T	S	H	P	A	N	I	G	S	A	A	R	A	X	K	T	X	G	L	H	R	L	T	I	V	T	P	N	L	X	A	T	P	X	T	E	N	P	P	V	F	N	P	D	D	V	Q	S	F	A	L	P	E	E	S	F	I	L	A	S	G	A	A	D	V	L	H	N	A	E
Template Known Secondary structure		G	G	G							S																	T	T								S						B	T	T	B	S	S						T	T		G	G	G												G	G	G						T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	D	T	L	D	E	A	L	A	G	C	S	L	V	V	G	T	S	A	R	S	R	T	L	P	W	P	M	L	D	P	R	E	C	G	L	K	S	V	A	E	A	A	N	T	P	V	A	L	V	F	G	R	E	R	V	G	L	T	N	E	E	L	Q	K	C	H	Y	H	V	A	I	A	A	N	P	E	Y	S
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		I	V	A	T	L	D	E	A	L	A	D	T	T	I	A	C	A	L	T	S	R	R	R	T	A	P	L	Q	T	P	R	.	D	L	V	P	E	L	L	Q	A	A	N	R	G	E	K	V	A	L	V	F	G	N	E	T	F	G	L	S	I	E	E	V	R	A	C	N	R	L	X	T	I	N	G	N	P	D	Y	F
Template Known Secondary structure				S							T	T										S							B				.												T	T									B	T	T	T	B								T		S									T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	L	A	M	A	V	Q	V	I	A	Y	E	V	R	M	A	W	L	A	T	Q	E	N	G	E	Q	V	E	H	E	E	T	P	Y	P	L	V	D	D	L	E	R	F	Y	G	H	L	E	Q	T
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		S	L	N	L	A	Q	A	V	Q	V	V	C	Y	E	I	F	S	Q	.	.	.	.	.	.	T	D	S	P	X	T	H	L	Q	Q	H	A	A	T	H	E	Q	I	K	G	X	L	A	H	X	E	S	V
Template Known Secondary structure																			T	.	.	.	.	.	.	T	T	S																				T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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