Job Description P0AE01 Confidence 100.00% Date Thu Jan 5 11:22:11 GMT 2012 Rank 11 Aligned Residues 156 % Identity 17% Template c3dcmX_ PDB info PDB header:transferase Chain: X: PDB Molecule:uncharacterized protein tm_1570; PDBTitle: crystal structure of the thermotoga maritima spout family2 rna-methyltransferase protein tm1570 in complex with s-3 adenosyl-l-methionine Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.													.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40													.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure													.				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	Q	N	I	R	I	V	L	V	E	.	T	S	H	.	.	.	.	.	.	.	.	.	.	.	.	T	G	N	M	G	S	V	A	R	A	M	K	T	M	G	L	T	N	L	W	L	V	N	P	L	V	.	.	.	.	.	.	.	.	.	.	.	.	K	P	D	S	Q	A	I	A	L	A	A	G	A	S	D
Query Conservation													.				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	E	K	V	Y	V	A	L	I	H	Y	P	I	K	G	K	D	G	S	I	I	S	T	A	V	T	N	L	D	V	H	D	I	A	R	T	A	R	T	Y	N	L	K	G	Y	Y	I	V	T	N	L	R	A	Q	Q	D	M	V	S	K	M	L	K	F	W	R	E	G	F	G	S	R	Y	N	P	S	R	A	E
Template Known Secondary structure			T	T	S								S	S				T	T		S																					T	T		S																								T	S	G	G	G	G	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																															.	.																																	.
Query SS confidence																																															.	.																																	.
Query Sequence		V	I	G	N	A	H	I	V	D	T	L	D	E	A	L	A	G	C	S	L	V	V	G	T	S	A	R	S	R	T	L	P	W	P	M	L	D	P	R	E	C	G	L	K	S	.	.	V	A	E	A	A	N	T	P	V	A	L	V	F	G	R	E	R	V	G	L	T	N	E	E	L	Q	K	C	H	Y	H	V	.
Query Conservation																																															.	.																																	.
Alig confidence																																															.	.															.																		.
Template Conservation																																																															.
Template Sequence		S	L	K	L	V	K	L	K	S	Y	L	E	D	V	L	E	D	I	E	S	V	E	G	E	R	P	L	I	F	F	T	S	A	K	K	R	E	N	D	I	S	F	E	E	G	R	R	I	I	I	E	T	E	K	P	V	L	I	L	L	G	.	T	G	W	G	L	P	D	E	I	L	E	I	S	D	Y	V	L	E
Template Known Secondary structure				T	T					S	S													S	S									S	S			S	S		B														S								.		T	T								T	T		S			B
Template Predicted Secondary structure																																																															.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	A	N	P	E	Y	S	S	L	N	L	A	M	A	V	Q	V	I	A	Y	E	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	R	A	Q	S	D	F	N	H	L	S	V	R	A	A	A	A	I	I	I	D	R	L	I
Template Known Secondary structure			T	T	T	T	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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