Job Description P0AE01 Confidence 29.53% Date Thu Jan 5 11:22:11 GMT 2012 Rank 124 Aligned Residues 126 % Identity 13% Template c3ai9X_ PDB info PDB header:transferase Chain: X: PDB Molecule:upf0217 protein mj1640; PDBTitle: crystal structure of duf358 protein reveals a putative spout-class2 rrna methyltransferase Resolution 1.55 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.					.	.	.	50	.	.	.														.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																							.	.	.						.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.						.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	I	V	L	V	E	T	S	H	T	G	N	M	G	S	V	A	R	A	M	K	T	M	G	L	T	N	L	W	L	V	N	P	L	V	K	.	.	.	P	D	S	Q	A	.	.	.	.	I	A	L	A	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	V	I	G	N	A	H	I	V	D
Query Conservation																																							.	.	.						.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.						.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Y	A	V	L	Y	G	Q	P	N	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	C	I	K	F	V	G	S	E	L	K	K	V	S	P	D	E	R	N	I	A	I	F	I	K	K	A	L	K	K	F	E	E	L	D	E	E	Q	R	K	D	W	N	Q	S	T	P	G	I	Y	V	R	R	L
Template Known Secondary structure									S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T			S			S	S																		S		T	T	G	G	G	S						T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.															.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		T	L	D	E	A	L	A	G	C	S	L	V	V	G	T	S	A	R	S	R	T	L	P	W	P	M	L	D	P	R	E	C	G	L	K	S	V	A	E	A	A	N	T	P	V	A	L	V	F	G	R	E	R	V	G	L	T	N	E	E	L	Q	K	.	.	.	.	C	H	Y	H	V	A	I	A	A	N	P	E	Y
Query Conservation																																																																	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																								.									.												.	.	.	.								.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																								.									.																							.	.	.	.
Template Sequence		G	F	R	N	L	V	L	E	K	.	.	.	.	.	.	.	.	.	.	L	E	E	G	K	N	I	Y	Y	L	H	X	N	G	E	D	V	E	N	V	D	I	E	.	N	P	V	F	I	I	G	D	.	H	I	G	I	G	E	E	D	E	R	F	L	D	E	I	K	A	K	R	I	S	L	.	.	.	.	S	P
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.			T	T													G	G	G					.	S								.	S	S		S											T	T						S	.	.	.	.		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																								.									.																							.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	L	N	L	A	M	A	V	Q	V	I	A	Y	E	V	R	M	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	L	H	A	N	H	C	X	T	X	X	H	N	V	L	D	K	K	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions