Job Description P0AE01 Confidence 89.12% Date Thu Jan 5 11:22:11 GMT 2012 Rank 45 Aligned Residues 122 % Identity 16% Template c2yy8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0106 protein ph0461; PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine Resolution 2.48 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		V	A	R	A	M	K	T	M	G	L	T	N	L	W	L	V	N	P	L	V	K	.	.	.	P	D	S	Q	A	I	A	L	A	A	G	A	S	D	V	I	G	N	A	H	I	V	D	T	L	D	E	A	L	A	G	C	S	L	V	V	G	T	S	A	R	S	R	T	L	P	W	P	M	L	D	P	R	E	C	G
Query Conservation																							.	.	.
Alig confidence																							.	.	.																			.	.	.													.	.	.	.	.	.
Template Conservation																																												.	.	.													.	.	.	.	.	.
Template Sequence		V	A	L	T	A	R	A	F	G	A	D	G	I	I	I	A	S	E	E	D	E	K	V	K	E	S	V	E	D	V	V	K	R	W	G	G	P	F	F	I	E	F	.	.	.	N	R	N	W	R	K	V	M	K	E	F	T	.	.	.	.	.	.	G	V	K	V	H	L	T	M	Y	G	L	H	V	D	D	V	I
Template Known Secondary structure									T	T		S					S	S	S																		S							.	.	.		S											.	.	.	.	.	.	S												G	G	G	T
Template Predicted Secondary structure																																												.	.	.													.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		98	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	K	S	V	A	E	.	A	A	N	T	P	V	A	L	V	F	G	R	E	R	V	G	L	T	N	E	E	L	Q	K	C	H	Y	H	V	A	I	A	A	N	P	E	Y	S	S	L	N	L	A	M	A	V	Q	V	I	A	Y	E	V	R
Query Conservation								.
Alig confidence								.															.	.																								.	.	.	.
Template Conservation																							.	.																								.	.	.	.
Template Sequence		E	E	L	K	E	K	L	K	K	G	E	D	F	M	I	I	V	G	A	E	K	.	.	V	P	R	E	V	Y	E	L	A	D	Y	N	V	A	I	G	N	Q	P	H	S	E	V	.	.	.	.	A	A	L	A	V	L	L	D	R	L	L
Template Known Secondary structure										T	T									S	S		.	.										S					S	S	S	S						.	.	.	.
Template Predicted Secondary structure																							.	.																								.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions