Job Description P0AE01 Confidence 100.00% Date Thu Jan 5 11:22:11 GMT 2012 Rank 7 Aligned Residues 151 % Identity 17% Template c2ha8A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:tar (hiv-1) rna loop binding protein; PDBTitle: methyltransferase domain of human tar (hiv-1) rna binding2 protein 1 Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		Q	N	I	R	I	V	L	V	E	T	S	H	T	G	N	M	G	S	V	A	R	A	M	K	T	M	G	L	T	N	L	W	L	V	N	P	L	V	K	P	D	S	Q	A	I	A	L	A	A	G	A	S	D	V	I	G	N	A	H	I	.	V	D	T	L	D	E	A	L	A	G	C	S	L	V	V	G	T	S	A
Query Conservation																																																														.
Alig confidence																																																														.												.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		S	R	L	I	V	V	A	S	L	I	D	K	P	T	N	L	G	G	L	C	R	T	C	E	V	F	G	A	S	V	L	V	V	G	S	L	Q	C	I	S	D	K	Q	F	Q	H	L	S	V	S	A	E	Q	W	L	P	L	V	E	V	K	P	P	Q	L	I	D	Y	L	Q	Q	K	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T																	T	T		S					S		G	G	G	G	G	S								T	T	G	G	G	T	S							G	G	G									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	R	T	L	P	W	P	M	L	D	P	R	E	C	G	L	K	S	V	A	E	A	A	N	T	P	V	A	L	V	F	G	R	E	R	V	G	L	T	N	E	E	L	Q	K	C	H	Y	H	V	A	I	A	A	N	P	E	Y	S	S	L	N	L	A	M	A	V	Q	V	I	A	Y	E	V	R	M	A	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	E	G	Y	T	I	I	G	V	E	Q	T	A	K	S	L	D	L	T	Q	Y	C	F	P	E	K	S	L	L	L	L	G	N	E	R	E	G	I	P	A	N	L	I	Q	Q	L	D	V	C	V	E	I	P	Q	Q	G	I	I	R	S	L	N	V	H	V	S	G	A	L	L	I	W	E	Y	T	R	Q	Q	L
Template Known Secondary structure				T	T										T	T				G	G	G					S	S							B	T	T	T	B	S						T	T		S									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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